+Marker Data: est_yfr03f09

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 57.8
Annotation
Source Name YFR03F09
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GGCAAGACAAGCTGAAAAGAGGAG
STS_primer_rev AGCCATGATGGATCTCAACTGCTT
amplicon_seq CAGCTAAAGTCTGAGCCAGACTCGGATGAGACAGTAAGTTGCTTTCACTTTTTGGGTTTAGTTATGTTTAGTAATTAGTTTTAGCTGAATTATTTTGTTTTTCTGGTGGCAATTTACTTCTCTTCATTGATTTTGCATTGTTCTTATTAATATTTCTATACATCATGTTTGTTGAGTTCTTCTGCAATGTTTTTCTTACTGCACAATTGATATTTCCATATTTGTTTATTTATCTTATTCGAGTAAATGTCTAATATTTTTTTGAGTCTCATCTTCGGATCGTGTCATATGATACATCAAATCTTACTAAATCATTTTAACCAGCAATGAAAGAGAGAGTGATGAATGGAGAGTTGGGGTAGGAGTCCATTTATGTGGATCTGATCTCTTTCTTTTTGATATTTAAGGTCTTAGTTACTATTTTGCATGTCATTCAGCATCAATTGCTGTTTTTGCCGAAAATGTTAACTGTTAACACACTAACCTACTGATGGTTTTGGGATCTTTGAGGCAAAAGTGGGGTCAAAATATGAGCTTTGGATAATAGACTGAAGTTCAATTTCAATAAAATAGTAATGCATTAGGAATGGTCATTCGTGCTAAGCAACTCTTGCATGACCTTTGTTGTCTTTATCAAATAGCAGTTGTCAACTTCGAGAAATATGAGTATACATGTGTCAAAATAATCACCTTGTGCAGTGTCTCTCTGCTGTTAGAGATGTC
SNP_position 641
allele_1 G
allele_2 A
ASP_primer_S GCGGGCCTCATATTTCTCGAAGTTGACAACTGT
ASP_primer_L GCGGGCAGGGCGGCCTCATATTTCTCGAAGTTGACAACGGC
Common_primer TGCTAAGCAACTCTTGCATGACCTTTG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_07 57.8
LW2010 E_07 78.9
LWA2010 LWA_07 80.627
LWAE2012 E_07 76.024
LWF2_2022 E_07 82.6

DB Program Definition E-Value

EST Name Species Strain