+Marker Data: est_smfl25k17

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 54.5
Annotation
Source Name SmFL25K17
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GGTCGCCAGAGTTCTCACCTTTAG
STS_primer_rev ATTAGCATTGTTTGAGCGACTGGC
amplicon_seq CTTCTCATGTGTTTTGTTTGTTGCTCTTCTGTTTATCTGTATTAGTCATTGAGGAAATTGTAATTTGATGCTACTTTGGTGGTTCTAAATTATGGAACAGTCAGGGGCCTTCAAGCTTTCAAGAGATGGTATGGTGATGCTTCAGTTTGCACCCGCTGCTGGTGTTCGTCAATATGATTGGAGTAGAAAACAGGTAATCATTACCTTTAGTTCCTCTCTTTGACCCGTCGTCGAATACATTTTACATGTGCTTCTCTTACACATGAAATGCAATGAGAAAAGGCTTTGTTAAAAATAATTAGATAGTAGATACGCAGTAGTAATTTGTTGTAGACGTGTACGTGGCACTTTTAGCTAACATGGTGTGTGTGCCATGTAGTCAGGCCATAATTTCTGCTCTCCCTGTGTTGATTTTGAAGTTCCTTTCTCAGTATTTGTGTTTTTTCAGGTCTTCTCGCTGTCTGTAACTGAAATTGGATCTATTATCAGCCTTGGGGCAAAAGATTCATGTGAGTTTTTCCATGATCCAAACAAAGGAAGAAGGTAAACCTACATCTTTTTGCATGGTCATAAAACCTAGACCTGCTGTTCGACAATTAGCTCCAGTTACCATCTATTGAATGTCCTGGATATATTTATTGATCTTAATGTATTTGTAGGCATAAACATACACTATTTTATAGATTACTTTCGTGGAGATCAATGTATCTAATTGTTAGGGATCCTATGTGTTGGGAACTAATTGATACGCATTCTATCTTTTGATAATTAGTATG
SNP_position 493
allele_1 T
allele_2 C
ASP_primer_S GCGGGCAAAAACTCACATGAATCTTTTGCCCCA
ASP_primer_L GCGGGCAGGGCGGCAAAAACTCACATGAATCTTTTGCCCCG
Common_primer TTCTCGCTGTCTGTAACTGAAATTGGA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_10 54.5
ALF2 AL10 52.1
LW2010 E_10 53.9
LWA2010 LWA_10 54.014
LWAE2012 E_10 60.03
LWF2_2022 E_10 56.4

DB Program Definition E-Value

EST Name Species Strain