+Marker Data: est_smfl08i20

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 50.4
Annotation
Source Name SmFL08I20
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GCATCCGTTTCTTCCAGCTTTATG
STS_primer_rev AGAATACAGGGATCCTGCCTTGTG
amplicon_seq CCTTCACTGTACATAACACGAATGCGGCAACCAGAATGTGTACAGAAGCTCCCAACAGAAATTCTAGGCACAGAACAGGTAACAGCAAAAGAACAATTACTCCTAGAAAAAAGTCATGTACCTCTTCAAGAGCTGAGATTGTTGCAGGGACATAATCGAGCTGGCGAGCACCATGGTTTGACACAATGATACCAGCTGCTCCAGCCTGAACTGCAATCCTGGCTGCAAGTCCAGGTGATAAATTGTTTCAGCATGAGTATAATAAAACTGAATAATGAAAGAGTATAGATTATTTAGAGTGTCAAATCATATACCATCCTCAGCCGTAAGTACACCCTTCACCAGGATTGGCATTGTAGTGATAGTCTGGAGCCACTGAACATCCTGTTCAAGTCCAGAAAGAAATTCTTGACTTGTGAATTTGTCTTGAGATTCATTTTTAAGCACACAGAATGCCCATCACAGTTTCAATTGAAATGCAAGTTCATCAAATCTTTTTTTGTCATGTCAAATTGAATTTCAACTTTCATTCTTTCAAACCTAACTTGAACTACTAACAAACGGATGTTCTTTTCCTCATTGGCCAACAAAATTGTATTTCATATCTTTAGAGTTTCTACCAATTTGAGATTAAATGAATAGTTCTCAGCCTACTAAATTCTCTAGGAATGACGGAAATGGAGAATAAAACATGGAATACATAGGATGAGACAGAGAAAGGTAATGTACCTTCCAACTCAAAGTGCGATCAATTTGACCAGCAACATACGAAGCTAATCCAGAGTCATTAGCCTGCAACAAGAAGACAATGTAAGAATATACATCAATAGATTACTTGATGAAGGATTATAGAAATATCCATCTATCCACTCACTTGGTCCATCTTGCCAAGGTCCAATCCTTCAAAGTTCTTCAATGTCAAAAATGGTGGCAACACGAATCTGCAAGGCGATGAAGATAAAATTAACTTGTAGAGATTCATATAGTAAGCTCCTTAGCTGTCTAAAAAGGCAACACAACCTAATGGAGTGACAGACTGACAGTAATTGTAGGATATACACCTGTTCTTAATATCAGCTTCTCTACGTCCGAGCCTTGGGGTATCAACTGTGAGGGCTATAGCCTTGAAACCTGCCTTTTCAGCTCTCCTCACAAGTTGAGCAACAACATTCCTGTCCTTGTAGACCTGAATATATGAGTAGATACAATTTAGACATAATATGGTGTATGCGTACATTCTCCTAAATATACGAATT
SNP_position 476
allele_1 A
allele_2 T
ASP_primer_S GCGGGCCAAAAAAAGATTTGATGAACTTGCATA
ASP_primer_L GCGGGCAGGGCGGCCAAAAAAAGATTTGATGAACTTGCATT
Common_primer TTCATTTTTAAGCACACAGAATGCCCA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_07 50.4
LW2010 E_07 69.8
LWA2010 LWA_07 72.545
LWAE2012 E_07 67.11
LWF2_2022 E_07 72.9

DB Program Definition E-Value

EST Name Species Strain