+Marker Data: est_sht03g11

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 73.8
Annotation
Source Name SHT03G11
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ccaagctggtgccaagaaagttat
STS_primer_rev tgacaacaaggtcaacgactgaga
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCATTGGNNNNNNNNTTGGTCATCCTTGAGTATATAAGACCTGCACAGTTCATATTGTTCAAAATTTTGAAGTTCGTTGCTTTGCAATTGCAGCAACGCCTCTTGCACCACTAACTGTTTGGCTCCATTTGTAAAAGTCATGGATGAAGAACTTGGTAAGCAGCAAATTGTACTAGAATAGCAGTACATTGGCACAAATTTTGTTATTGCGTTAACTATTTCCAACCACATTTCAGGAATTGTGAAAGGTACAATGACAACGACTCACTCTTACACCGGAGATCAGGTAATAAACCATTGAAACACCTTCTCGTACATGGAGCCTTCATGGCAATACGTTGATGGTAGAAACTGTAACTCCGCTAATACTGTTGGTTCCGTTATATGCAGAGGCTTCTCGATGCTTCTCACCGTGACTTAAGGAGAGCGAGAGCTGCTGCATTGAACATTGTCCCAACCAGCACTGGTGCAGCCANAGGCTGTGTCTTTAGTGCTACCTCAGCTTAAGGGAAAGCTCAACGGNNNNNNNNNNNNNNNNCCNNNNNNNNNNNNNN
SNP_position 433
allele_1 T
allele_2 G
ASP_primer_S GCGGGCGTATTGCCATGAAGGCTCCATGTACGA
ASP_primer_L GCGGGCAGGGCGGCGTATTGCCATGAAGGCTCCATGTAAGC
Common_primer CACCGGAGATCAGGTAATAAACCATTGA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 G G
Nakate Shinkuro G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_04 73.8
LWA2010 LWA_04 104.125
LWAE2012 E_04 101.996

DB Program Definition E-Value

EST Name Species Strain