+Marker Data: est_sht03g10

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 13.5
Annotation
Source Name SHT03G10
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CCTAGGAGACTCGTCTTGTCAGGC
STS_primer_rev GGAATGCATCCCACAAAGACCATA
amplicon_seq ACAGTACAGCAGTGTTGTAATATGATGGGTCCATTTACGGGACACCTGTGGAGAGTATGTGTCAACTTTTAAGTTTTGAGCAAATAAAATTGATATAACGAAAAGCAGATTACGAAGTGCTTTGTACAGAAACCAAGGTAGTGAAATTTAACAGAGCTGTAATGATAGACTGCTAGATCATAATGATAGTGAACTTGAACAACCCAGAATACATGTTCTTCATCTGATTAACTCTAAATGTACTCCATATACATCTAGCGCATGACATGATCCTCTATTTGCTTGTACGAATTATGAGATACCAACAAAAAAAATGATGCATAAGTTCACTTGGATCTATCTTGCAAGTTTTTACCATTATTTTCAGATTTCACTGTACAATATACAGTAGAAGATCTATTTTTTGATAGGTACATACAGCTTAACACATTTGATAGACGTAAGAAAGCAAGATGACTGTTCAAGTTGCCCATGACTAATCACTAGCACGAGGCACAGACCTTGAGATAAATTATAGAAGCAATGTTTGTGTTACCAGACATAACGCCTCTGTTATCGGAACTACTAGGACGTGCAAACCATTTCTATAAGAAAGGATTAATATATATTTCAAGTTCTGCTTATGACTTTACATCATATATGATAGACAGCTCAAGTGAAATACAAGATTACCAGTTTACCATCGATGTAATCAAAGGGATTGCACTTAGATAAAACTTACCAAACTGGGAGCAGCCCAACCAACAACGGCAGACAAAATGGTCATTACCTACAGCCACCAACATTTCAAGGCAGACTGTTATCACCCAGAATATAAATGGAAAATGGTGAAGGGAAGGTGTATGAAGTCTACATCAAGCCCCC
SNP_position 835
allele_1 G
allele_2 A
ASP_primer_S GCGGGCGGCTTGATGTAGACTTCATACACCTTT
ASP_primer_L GCGGGCAGGGCGGCGGCTTGATGTAGACTTCATACACCTTC
Common_primer CATTTCAAGGCAGACTGTTATCACCCA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_10 13.5
ALF2 AL10 5.0
LW2010 E_10 15.1
LWA2010 LWA_10 14.362
LWAE2012 E_10 18.25
LWF2_2022 E_10 15.3

DB Program Definition E-Value

EST Name Species Strain