+Marker Data: est_sht03c12

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 44.0
Annotation
Source Name SHT03C12
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TTAATTGGTGGCTTTGCTGGTCTT
STS_primer_rev GTATGCAGATCCTAGACCTGCCCC
amplicon_seq TCGGTGGCTTTTTTCACATTATGGTCTGTTTCAGATGTGTTTTTGTTTTGCTTATGTTTGTTTGTGTGATGCTTTATTGTGCAATTGGTGTTGGATGAATTAAATTGGGAAAATACCGAAAAGGTTTTTTTGATTGGAAATGTTTTAGTTTCGTGGGTTTTACCGTGAAATTGAAACTGGACTAAGAGCTTTTTGCTTGCAAGCATCTTCTGTCATTTCACCAGAGAGTGTGAAAATGCTTATATGGGTTAGTTTCCTCTATTACTTTCGACTATCTTGGACATTTAACTTGTACTTTTGTTTAGGTTTGTTTTTGTGTTGCAGTGGTTGTGTAATCTTATATTGAAAGAAAATAGGAAATGAGAGAGAGGGGAGAGGGAGACACACACACACACACACAGAGAGAGAGAGAGAGATAAGTGACGCCCATTTGTTTACAAATCTATCAATGGTTGAAGGGCAATGGGCAATAGTTGTGAAAATAAATATCACTGGATTAGTTACAGGTTGGTTTCTTATTAGCTTCATTCTGTGTGGTTCCATATTGTTTGTGAGAATTTGAAGAATTATTTCTTTTTTATGCTTAGCTATATGCAGAGTTTGTGATTGCAGAGAGAAAGGGAACCAAGTGCAGCCTATGGCATGCAAGACATTAACTTTTGATGTAGTATCTCTTGCAGTTGCCTTGCTAGTCAATCTCCCCCTTCCTATCTTGAAGTTTTTGGTAGCTGAATGTCTGGGTGTAGGTTCTAGTGGTGCTTGAAACTTTCTCATTGTTTTTCGATATATGTAATATGAGTAGTGTTGCTATAATATGATCTGTCTCTGCTTGTGTTTCTCCGAGTGACCTCCAAAATCTATTAGGCAGATAATGCAATCAGTTAATTCATTTGTATTCATTATTGTCATAGGGAGTCCCGTGACACGCTGGCATCTACAGCAT
SNP_position 570
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTGCATATAGCTAAGCATAAAAAAGAAA
ASP_primer_L GCGGGCAGGGCGGCTGCATATAGCTAAGCATAAAAAAGCAG
Common_primer TGTGTGGTTCCATATTGTTTGTGAGAA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_12 44.0
LW2010 E_12 50.3
LWA2010 LWA_12 46.324
LWAE2012 E_12 47.187
LWF2_2022 E_12 55.4

DB Program Definition E-Value

EST Name Species Strain