+Marker Data: est_sht01h14

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 67.4
Annotation
Source Name SHT01H14
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd AGAGAGAACACTCAGCCCTGCTTC
STS_primer_rev ACTGCCAGTACCCATGCAAAATCT
amplicon_seq CGTGGCCTGGTGCTCGTAGTATTTTTTGAATTGACTTTTCATTCTGTTGTTTCTTGAAATGTTCGATCTGATAAGTACAAATGAGCATAGAAGTATATTGTTGTGTCCACAAGTGTACTTAAAATATAGTTAGTACATAATTGATGTTATCGAAGGAGTGTATACATTAGTTCAAAAACAACAAAGTAGAGTTTGTGTTGTTGTATTGGTGAGTTTATAGCTATAAGGTAGTTTTCGAGGTAAAGTAGATTGTAGAATAAGGGCAAAAGTTTCAATATCCTCAAGATAAAACTAAGAAGTACATGTTCTGATTCATGCTTGGCTTCAGTTTTAGATGCTGTAGTATGTTTTCTGATGGTTTTTGGCCTGTGAAGAACATTTTCATCCATCCTTGTTATCACTCGATTCTTTCTTATAGGTCTCAGGAACATAACTCTTATGGTTCCTTTCTATATTCTAGTGTAAGACATAACTTGGACCACTTGTCTTCTTCTTGGTGATGGTGCTCATTCGCAACAGATCTAGTCATTTACTTGCCAGTTTCCAGCCAAGAGAAACTAGCTTTGGTTTGAGCTATCCCTGTCTCTTATTTTAGTGATGTTTTTGCTTGTATATATCAATTATCAGAATTTCCAGAAGTCCGAGCAAAGACCCTAAACCCATATTTCAATTGCTTCAATGGATCTTAAGCTGGCTTGTTGAATTGGTCTTGTTTTGTATAACTTTAAATTGACACGTATGACTTATTGATCAATATCTCTGAGATGATGGATAGAGCAAATCATGCATTTTCTTGGAAATCTTTCCGAAATGCTCATATTATGGATCTAGGATTTGTTTTTAAACCCCATAATTTGTATGGCACTTCAAAGTGCTTTTAAGGAATTTTTGGATTGCAGCTACTTACACAAATGACCAATTGCCAATGAGCTATCCGTGGCTCTGATCCAACAATTTTCTTCAACTTGCCATTTCGTCCTGGCTTTGACTTGAATCTCTCCTTATTATTAAATAGCGTCATTGTAATTAGGAAGTGTTCTAATGCTGACCCTGAGGTGGTTCTATCTGCTCCAGAGTTTTTGATCATCGAAGAGTCACAAAGAGAAGGGTGATTTATGATTTTGTTGTTTTAGTTTCTCTAAAATTTGCACATGACTATTCTTGATAGTTTCCAATTTAACATCAAAGTAAATCTTGGGTGCCATGTGCCATCAATTAAAGATTGCATGCATAGACATTACATCACCCAATAAAAGAGGAGAATTGAGTGATTGAACGATAAGATCTTACTAAGGTTCAATTATTGAAAAAGTCCTCAGTAGATTGTCTGACCAAAGGCTGTAGACCTAGTTAATCTATAAAGCTTAACATCATTTTGAGGACCGACTTAGAGCTAATACTTACGAGGAAAGAGTTTTATGTGCCCGGA
SNP_position 1053
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTTAGGAAGTGTTCTAATGCTGACCCTA
ASP_primer_L GCGGGCAGGGCGGCTTAGGAAGTGTTCTAATGCTGACCCTG
Common_primer CTTCGATGATCAAAAACTCTGGAGCAG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_04 67.4
ALF2 AL04 113.2
LWA2010 LWA_04 97.73
LWAE2012 E_04 97.59

DB Program Definition E-Value

EST Name Species Strain