+Marker Data: est_sep07b18

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 62.3
Annotation
Source Name SEP07B18
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GCCATGATCGGTTGAATGGTAACT
STS_primer_rev GTGTTGTGCAGAATCGAGTCCAGT
amplicon_seq GAATCTGCAGCCATTCTACAGACATGTTACTGTAAGCTTCCTACTCACCTACTATATCCCTTCCCTCTTTTTTTGATAAATAGTTGAATTGTTTGACCATCTCACCTAAAACCTTAAGTTATTATAAGAATCACAGTTTTATTTACTTAGTTATATTCTTAACATGCCCCTCACACGTTTGTGGCCCAAGCATGTTAAAATTCTTTTGGACAATCGGTAATAGTGAGACTCGAACCCAGAACCTGTGTGCTTTGATTCATATTGGGCCCCTATCTCATATTGTCCGCACTCCAATTGCTAGCACAGGGTGTGCTGGGGTGTTGAGTTCCCACATCGGTGAGTAAACGGTGATTGGTCTCTTTACATGGTCTTGGGCAATCCTTACCTCTTGAACTAGCTTTTGAGGTTGAGTTAGGTCCAATATCCATGTTCTTTGTTAGTGATACTTTATAAACGGGAAACAACATTAAGACAGTGCATTAAAATTACTAAGAACGGTAAAACAACACTAAGACAGTCATTGAAATTATTAAGTGTTCAAAGCCCCAATCACATCTAACACGAAATATACATCACTTACAAGGCCATGTTGCACTGACAAACTAGCAAAGAACCTCGTTTTATTTAGTTGCAACTGTAACTCTACATGGAAGCAACTTCTATAAGCACGATTGCAAACTTTCAGAAACTGCGAAACCACAATGGTGACAATGCCAATAGTTCCATTATTAGGATTCCAACTTACACTCTTTTCTC
SNP_position 549
allele_1 A
allele_2 G
ASP_primer_S GCGGGCGAAATTATTAAGTGTTCAAAGCCCCAA
ASP_primer_L GCGGGCAGGGCGGCGAAATTATTAAGTGTTCAAAGCCCCAG
Common_primer TTGTCAGTGCAACATGGCCTTGTAAGT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_07 62.3
LW2010 E_07 87.0
LWA2010 LWA_07 86.441
LWAE2012 E_07 83.32
LWF2_2022 E_07 95.2

DB Program Definition E-Value

EST Name Species Strain