+Marker Data: est_pla07g24

Crop eggplant
Population AL2010
Linkage Group E_09
Marker Type SNP
Map Position 79.9
Annotation
Source Name PLA07G24
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TGGTTGGTGGATATTATGACGCTG
STS_primer_rev TACTTATCCGCAAAGGCAAACACC
amplicon_seq AATTTTCTTTATATGTATACAACAAATCATGTTGGTTTCTGATAAATTCTACTAGTCCATCCATTTCAATTTCTTTTGAATCTTGTAGTCTTGTTACCAAGGAAAAAGGCGCTCTTTTCTTGAAGAGACAAAAAGAATAAGTAAGACGAACAAATTGAAACGAAGGAGTCCTACTGGTCACTAATTTTGTTAGAACTCAAAGGGAGTTTGATAGAAATACCCTGATGGCCCTTTTGATTAGTATCTTGGAGTAAGATGGGTTGCATTTTCGAAAGACTAAAGAAGCAGCAGCCAGAGCAGCAGCAGTCTCAGCAGCAACCTCAGTTCCTGGAGTGTTTTTGTCAATCTTGAATACACTTCTTGGGGTGTCCATATCCTCAGGTCTCTCCCAACAAGAGTGGTCACTTCCTGCATCTCCAACCTACGCCGAGATCGTATTGCTTCAAGACAAGATTATTGACTACAAAGTTGAGATTATTATTTACAGAATTGAACCTGAACATAAATGGTGTCTGGATGGGCTGTGGCCTTGAGAAGATATTCAGTAGCCCAGCCAATGGCTTGTTTTGCGTTTAGTAACTCTCCTTTCATCAATCCACCAAACTCAATAACACTCCATGATAGCATTGTGGTGGTGAATGCCATTGGGAAACCGAACTTCACGTTGTCTCCAGCGTCATAATACCCCCCCCCACAAAAAAA
SNP_position 584
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTTGAGTTTGGTGGATTGATGAAAGA
ASP_primer_L GCGGGCAGGGCGGCTTGAGTTTGGTGGATTGATGAACGG
Common_primer GCCAATGGCTTGTTTTGCGTTTAGT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_09 79.9
ALF2 AL09 98.1
LWA2010 LWA_09 78.199
LWAE2012 E_09 61.856
NAF2 NA09 82.3

DB Program Definition E-Value

EST Name Species Strain