+Marker Data: est_per02h15

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 0.0
Annotation
Source Name PER02H15
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TTTGCAAGCATGGACAACAT
STS_primer_rev CAGCAGGTGTAAAGAGGGATAAA
amplicon_seq AATGGGCACCAGCTCTCTATCAGCCACCTCCCGTCGAACTGCATCTTGGAGTGGAAACTTTCCTGATGCTTATTCACCAAATAAATCTGAAATAAAACCACCAGGCTCTAGATTGAGTATGCCTCCGTCTTCATTCATGCCTAATGATGCTAATTCGATGCATTCCTCAATGAATGACGGCAGTTTCAGTGATGACCTTCATGAAGTGGACCTGTGACGCATCAAGATGTATATACCAAGTTTTGCTTGTCATCGTGGTATCCTGCTCGGAATCTCTTCACTTTGGTGGTAACAGAAATGTGGTGTGAGAAGATTGAAGCCCTTTCCTGTCTTCTCACACCACAATATACCCTCCTCTTCTCTTCTTTTTTATTTAGCTACTTTTTTGTAAGATCATTTGTATGTTGAAAGCCAATTTATCTGTAGGGATATAGGTTTTATTTCTTTTACTCTCCCCCGCGGCGGGGGGGAAANNNNNNNNNNNNNNNNNCCCCACCCNNNNNNNNCTCTTTTTTTTGGCCAGGGCCGCAACATATCCAATAGAGGAATTGGCACCAGCTCTCTATCAGCCCCCTCCCGTCGAACTGCATCTTGGAGTGGAAACTTTCCTGATGCTTATTCACCAAATAAATCTGAAATAAAACCACCAGGCTCTAGATTGAGTATGCCTCCGTCTTCATTCATGCCTAGTGATGCTAATTCGATGCATTCCTCAACGAATGACGGCAGTTTCAGTGATGACCTTCATGAAGTAGACCTGTGACGCATCAAGATGTATATACCAAGTTTTGCTCGTCGTCGTGGTATCCTGCTCGGAATCTCTTCACTTTGGTGGTAAGCAGAATGTGGTCAATGAAGATTGGAGCCCTTTCCTGTCTTCTCACACCCCACTACCTCCTCCTATTCTTTTTCCTTTTAATAAGGTACTTTTTTGTAAGATCCAGTTGTATGTGAAAGCCAATTTAGCTGTAGGGATATACGT
SNP_position 360
allele_1 C
allele_2 G
ASP_primer_S GCGGGCAGGGCGGCCTCACACCACAATATACCCTCCTCTTC
ASP_primer_L GCGGGCCTCACACCACAATATACCCTCCTCTTG
Common_primer GGCTTTCAACATACAACTGATCTTACAAAA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 G G
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_08 0.0
ALF2 AL08 0.0
LW2010 E_08 0.0
LWA2010 LWA_08 0.0
LWAE2012 E_08 5.05

DB Program Definition E-Value

EST Name Species Strain