+Marker Data: est_ovs05a08

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 61.2
Annotation
Source Name OVS05A08
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd tgctggtgtaccttatattgttgttgg
STS_primer_rev ttagttctcaatctttctgtgcgga
amplicon_seq ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGCCACGGGAAAAATTGAAATTAAAGGTCTGCCGAAAAAGATAATGAGTCAATTCTTTTTGAAACAGATCAAAAAGGAAAGTATGTCATTCTTTTTGAAATGGAGGGANGTATAAAGGCTTTAGAGACANGATCTTTGCTTTTTTCTTTAATCTATGTGCAACTTAGGGATAAGGTTTTCGTAGATTCTACCCTCCCCAAGCACCATTTGTGGTATTACATTAGCTAGGCAGTTTTTGTTGTTGTTATGCTTAGTGACAAGAGTTTCTTCTCATTCATTTCTGCATTAATTTTCCGCAAGCAAGGGAATGTTGCTTTTCTGAAAAATAAATGGAAATGTTGTTGAAAACACTAAAAAATATTTCTTTGTATGTTTGGTGTAAAAACAGAGTACTGTGGCAAATGTCGTCTTTTTCGGCCCCATCTTGGTATATATTCATGAAATTGTTAGTGTGGACTTACAGTGACCGGTTACAACCCAAGTTAAATTTTTTATTGTTTGACAAGTGACTCAAAGTTAAGTGTTATACTGTANNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 442
allele_1 A
allele_2 T
ASP_primer_S GCGGGCAGTTTTTGTTGTTGTTATGCTTAGTGT
ASP_primer_L GCGGGCAGGGCGGCAGTTTTTGTTGTTGTTATGCTTAGTGA
Common_primer GCTTGCGGAAAATTAATGCAGAAATGA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_08 61.2
LW2010 E_08 66.2
LWA2010 LWA_08 62.638
LWAE2012 E_08 62.874
LWF2_2022 E_08 75.9

DB Program Definition E-Value

EST Name Species Strain