+Marker Data: est_ls504f15

Crop eggplant
Population AL2010
Linkage Group E_11
Marker Type SNP
Map Position 43.8
Annotation
Source Name LS504F15
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ggtaggggagcttatggaatcgtc
STS_primer_rev ctttagcccacggagaagctgata
amplicon_seq NNNNNNNNNNNNNNNNNGCAGATAAAAAAGACGAATTTGTGGTAATGTTTCCTTGTGATTTCAAATGACCAGTCTCATTATTCATGTATAAAATATTTACCGTGTTAAAAAATTACAAAACTTGTGTATATCATCTTTGTTATTTTAGGAATTTGTGAAGGAGAAGGTTAAAGAAGGAAAGAAGAGCAACCGAGAGGTATATTTTGAGAAATTTGTTGCAATCCTATTTCCCTTTTCCGTCACAAAGCTGATGGTTTGCAGTCCTATTATCTTTTTTCATGTTATACTTGATTTGCTTATGTTCATGTCTGTACATATTCTATGGTTTAGGCGAGAGAAGCCAGGAAAAAAGCTATACAAGAGATGAGTGAAGAAGCTAAAGCTGCATTTCAGAGTATGAAGTTCTATAAATTTTATCCGGTGCCCTCACCTGATGCTCCTGATGTATCTCAGGTTAAGGTGAGTATTCTGTTCTAGTCTTTAGTATCTTATAAATAGGTCTAGGCATGATCTCATGTCTGCTAGCTGACGCCTTGTCAGGTCAAAAGCTTCAGTATTGAACTGGCAACANGACTCTGCGTACTCTTTTAAATANTAAACTGTTGATGTTAAAGAATTAAGTTTATGTTTGAGAGAGACAATTTATAATGAGATCTCATGTTTAGTTGATATGTTAAGACTTAGCTATGTTTTGGAAATAAAGTTCTTACCTCTTCCTTTTTCTTTGCAGTCTCCANNNNNNNNNNNNNNNNNNN
SNP_position 530
allele_1 C
allele_2 T
ASP_primer_S GCGGGCGGCATGATCTCATGTCTGCTAGCTGAT
ASP_primer_L GCGGGCAGGGCGGCGGCATGATCTCATGTCTGCTAGCTGAC
Common_primer TGTTGCCAGTTCAATACTGAAGCTTTT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_11 43.8
ALF2 AL11 52.4
LWA2010 LWA_11 44.699
LWAE2012 E_11 59.013

DB Program Definition E-Value

EST Name Species Strain