+Marker Data: est_ls502j22

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 32.2
Annotation
Source Name LS502J22
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CAACGGGATAGCCAAGAAGA
STS_primer_rev ACCAGCCGTTGTGATTCTTT
amplicon_seq AGGGCCAAGGGCTCCAGGAATAAGAAGAAAGTCTTGATAGGTCGTCTGACTGTTCCTCATTGCAATGGAGGTGGAAGCAAGGATATTGATAGCAATAGAGGGAAGATTTGTATGTCTGCGGAAAATGCCGGGGAACTGGACGAATTTGTTGTGGGTTACAAAAAAAATATAGTCAACCGAGGCCGGCCCAGGGGTTCAGAGACTAAGAAGGAAATCACATCAGGCTACTTGAGTATTGCTAACGCTACTAGTGGACATGAAGAAGATGTTTTCTGCCAAGGTGAGAATGAGAAAAGATCCCCGCGCCGGCGGGAAAA
SNP_position 110
allele_1 G
allele_2 T
ASP_primer_S GCGGGCCCGGCATTTTCCGCAGACATAA
ASP_primer_L GCGGGCAGGGCGGCCCGGCATTTTCCGCAGACATAC
Common_primer GCAATGGAGGTGGAAGCAAGGAT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 T T
Nakate Shinkuro G G
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 32.2
ALF2 AL03 27.9
LWA2010 LWA_03 59.225
LWAE2012 E_03 67.698

DB Program Definition E-Value

EST Name Species Strain