+Marker Data: est_ls004l13

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 97.0
Annotation
Source Name LS004L13
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd AGCGTTGGATTATGCTCGATTGAA
STS_primer_rev AAACGCTAGTTTCTGGGCTTTTCC
amplicon_seq GCATCCTTACACCTGGACAAACAGATATAGACTTAAACTTCAAAAGTTGAGTAATTTGAGTTGAAAAGAATTGCCAAAAAAAGAGAAAAAAAAGTTGATTATCTTTTCACATGAGGCAATGAAATGAGCTTAAATGAAAATGGAATTCACGTAGTCGATCCCAACTTGTTTGAAACAAACAAGTTGTTGTTTGTAACTATTAGCTTTTTACATGCTGATATTTTTCTCGGTATGCTAATCACAAGTTTTATATTTCTATAAAGAAAAGGAATGTTTGTTCTGTTTGATTCGGTGTGCATCACTTTCCCACTATTAATTTATTTTTAAAATCATTTCCTTTCTCTTTCTGGATTTGGCTTGTTGTGTAGATTTCTCTTTCAATAATTTTAACCACTCCACTCTCTATAGAAAAGACCCCTCTTTTGGTTTATGGGGTGTCATGAACTGTTTATTGGATCATGACTGTTTAGTGAATAGTGACATCCAATATCTCAACTAAATCCATATTTGTCACAACTCAACCATTTGACAGTCCTTAGGAATAGTTATAGTTTTTTATATAAGATAACATAACATAAAGTGGACATTGTTCCACGTTAAGTGTAGGCCATTACTGCGCTTATCTTCTTTTTTTGCTCTAATAATGACAGTAAATTTATACTACCCCTGACCACCAATCTATGTGACATACTTTATTTTGTTGATGACTGTGGTGTCCAAGCCATCTTCTGCACAATTTGACTAATTCCAGATATAATAGATATAAGGTAACTCACCTAGTATTGTTGTCTTCGCTGAGGTTTGAAGACCTCGTTACTCTCATCTACTTCATTAACCACTATGATTAAAACCAAATTAATTTAATAATTTCTATTCTGCCTTTAATTAGATGTTTCATGATCGTGCACAAAGATCCCAGAGTGTTTTGAACCACAAATTTCAGAAGTACTTTCAGATGAATTGGGATAAAACAAGTAGTAGATATATACTCTATGAAAAAATTCAACTATTTAGGTTGACGCAAAAAATCGTCGCACGGGACCTGAACCCTTGAAGTTTAGCAATTTGTATACTACTAATAGAAATTAAAATTGTGAGGCTACCTTGGAAGCATTTAAACTGACGCGATTCCACCGTGAAACCGCCGTCTCCGGTGGGGAAATGAGAATGACT
SNP_position 144
allele_1 A
allele_2 G
ASP_primer_S GCGGGCAACAAGTTGGGATCGACTACGTGAATT
ASP_primer_L GCGGGCAGGGCGGCAACAAGTTGGGATCGACTACGTGACTC
Common_primer TTTCACATGAGGCAATGAAATGAGCTT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_10 97.0
ALF2 AL10 121.3
LW2010 E_10 84.1
LWA2010 LWA_10 84.271
LWAE2012 E_10 91.659
LWF2_2022 E_10 87.4

DB Program Definition E-Value

EST Name Species Strain