+Marker Data: est_ls004e10

Crop eggplant
Population AL2010
Linkage Group E_09
Marker Type SNP
Map Position 19.8
Annotation
Source Name LS004E10
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CGTGAACAGGACAGGTTTTTACCA
STS_primer_rev ACCGAGCAAGATACACCTTGAGTG
amplicon_seq GTATATCATTCAACCAAGAGTTGCCATTGCCCATAGCAAATCGTCACCATTAATAGTTTTTCTTTTCTCTCTCTGGCACTTGTCACTTGCCCTACAATTCCATCAGGAAACAAGCAACATTGTCAAGGAAATCAACAACATCAAAAATATAAATTTTTCCAAAAAAAAAACAACGAAGAAACAGGAAAAAAAAAGAGCGAACATCACCTACAGCCTATAGCATATCCAGACACCTAAAAACAACATATATTAAACAAAGATGGAGTCTTCGTATAATGGGACAATACTAATCAAAATAGTTGCTTCATCTCAATTTTATTTATTTTACTTTCCTTTTTAATCCGTTCCAATAAGAATGTCTCATTCCTTTTCTGACACCTCGTTAATTTTAACTTTCCACTTGACATGTTAAAACCACAAGATTAAACAACATTTTGGTACATTCCACATATCTTTCGTTTAAAACCACAAGATCCAAAACTCTTTTTTATTTTCTTAGACTCACTGTCAAATCAAAACAAGACAATCAAATTAAAATTGAGAAAGTAGTTCAACAACAGAAAGCATGTTCAATAACGTTTAAAAGATAAACTTTCAAAGATAACATCAATCAATAATCATCACGAAGGGGAAATGGATCATAATTAATCAATCAAACACGCAATCGACAAAAAAAAGATTAGATTTTTAACACAACACTACAGCATTTATGAATCAAAATTCAACCACATGAGCTATACAAATCATAAAACCCATTCCAATACTCATATAATTCATCATTTCACATCCATCTTAACATTCTTTAAACACCAGTTAAAAGACATCAAGAACATACTCGCTAGTGATGAAGCTAATGAACTCAGAAACACATTCCTGAACAGTCTCCTTAGCATCCTTAGCAATTTTTCCATTAGCAGGAAGCCCCTCTCATGTCTACTAATT
SNP_position 637
allele_1 G
allele_2 C
ASP_primer_S GCGGGCTCAATAATCATCACGAAGGGGAAATGC
ASP_primer_L GCGGGCAGGGCGGCTCAATAATCATCACGAAGGGGAAATGG
Common_primer TTTTTGTCGATTGCGTGTTTGATTGAT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 C C
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_09 19.8
ALF2 AL09 29.5
LW2010 E_09 34.1
LWA2010 LWA_09 33.302
LWAE2012 E_09 20.323
LWF2_2022 E_09 33.3
NAF2 NA09 29.2

DB Program Definition E-Value

EST Name Species Strain