+Marker Data: est_cpa05n15

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 104.4
Annotation
Source Name CPA05N15
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GAAGCAGAGCAGGAGTGAGAAGAA
STS_primer_rev TGAGCTCAAGTCCTCAATCTTTGC
amplicon_seq TTGATGCATAGCCGGAGTGAGACGAAGAGTTGAAAAGCTAGGCTACAGCTAGGATGAGCCGATCCCAGGTGTCAGCCGTGTAACTGTCAAGAAAAGCAAAAATGTAGGTTGACATCTTATTATTTGTGCTCACTTTCCCTTCTTCTAGTGTTTTCTTTTTAAATCTAAGTTGCTTAGGTCTTAGTGAATAACTTTCTTCTGATTCTTTCGTTTTATTTCATTCAGATACTATTTGTCATCTCAAAACCAGATGTTTTCAAAAGCCCAAATTCCGACACCTATGTGATATTTGGTGAAGCAAAGATTTTGGAAGCAGAGCAGGAGTGAGAAGAAGAGTCGAAAAGCTATGCTAAAGCTAGGAATGAAGCCGATCCCAGGTGTCAGCCGTGTAACTGTCAAGAAAAGCAAAAATGTAGGTTGACATCTTATTATTTGTGCTCACTTTCCCTTCTTCTAGTGTTTTCTTTTTAAATCTAAGTTGCTTAGGTCTTAGTGAATAACTTTCTTCTGATTCTTTCGTTTTATTTCATTCAGATACTATTTGTCATCTCAAAACCAGATGTTTCAAAAGCCCAAATCCGACACATATTG
SNP_position 183
allele_1 A
allele_2 G
ASP_primer_S GCGGGCGAAAGAATCAGAAGAAAGTTATTCACT
ASP_primer_L GCGGGCAGGGCGGCGAAAGAATCAGAAGAAAGTTATTCCCC
Common_primer GCTCACTTTCCCTTCTTCTAGTGTTTTCTT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_10 104.4
LWA2010 LWA_10 91.797
LWAE2012 E_10 98.821

DB Program Definition E-Value

EST Name Species Strain