+Marker Data: est_cpa02h11

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 101.6
Annotation
Source Name CPA02H11
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd CCAATGAAGGGTATGCTTACTGGC
STS_primer_rev CCATGTCGATGATGGAGTGGATAA
amplicon_seq TATTTGCGAAAACCCACGGAATGCTTCTGCAAAAGACCGATCATGCCCGACATCTGAACGTGGGAGCATCTTAGCTCTGTATTACGGACCTTCGCATTCCGGGCATTAAACAGCTCCCACCCCTCGCTGCTGATATTCAACTTGAACGATATTATTGTCCCTCCATGTCGGAGATGGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTGAGTGTGGATCTGGGTAGTGTCCTGAATGCCGACGTTGGTGATTCTGAAAGAGTGAACGGCCCAGTTCAAATAGAAAGCATGCTCGGCCTTCCTCAGAGGTAATCCCTCTCTCAATGCAGCTTCATCAATTTGGATGACAGTGATTCCGGCCTTCTCCAAATCCTCCACTTCATCCTTAATGGCCAAAGCAATCTGGTAGCAGGTCTCAAATCTGGAGAAAGCAATGATGACGGTTTGCATTGAGTTCATTACACATGATCGGAGAACGTTTATACGTCACATTAGGAGTGGGGTGAAAAAGTTACCTTGGTTGGTCGTTTCTGACAAAAGACCAGTTGAGAATGGTGACAGGGCCAGTAAGCATACCCTTTCATTGGA
SNP_position 227
allele_1 G
allele_2 T
ASP_primer_S GCGGGCGAGTAGCACATGTGAGTGTGGATCTGT
ASP_primer_L GCGGGCAGGGCGGCGAGTAGCACATGTGAGTGTGGATCTGG
Common_primer GCCGTTCACTCTTTCAGAATCACCAAC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 G G
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_10 101.6
LWA2010 LWA_10 88.936
LWAE2012 E_10 94.365

DB Program Definition E-Value

EST Name Species Strain