+Marker Data: est_cal06a19

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 44.9
Annotation
Source Name CAL06A19
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ggtttcgtcgatatttgggctctt
STS_primer_rev gagtccacactccaaatgtcctcc
amplicon_seq CAGTAAGTTTACACTACTTTTTTGCTTATATTACGTTTCGTGCTTTGCGACGCACGCTCATCTTGGCTTTTTTTTTTTTTTnnnnnGTTTCAATCGACTTTTGATTGATGTATGAAGAAACTTCTGTAGCTGCTTAGCTTTTGAATTTGGAACCTAAGAAAATTTATTATCTCATGCAATATTTTGTAGCACTTCTTTTATGTCTCTCTTAATTTTTGACTTCTAATTCTGCATGTTTATATAGAAAGGTAAAATTGATCCCCTTGACTAGAATTTTGTAATTCATAAATGGGCATACCAGGTACCTCCAAGCTCTCTACATAGTTTTATCCTTTCTTAGAGAAACCTTCTTCCAACAATTGTATCAAAAAGCCTACTTAAAGAGTTCTCTTTGAGTCTCTTCAAGTTTCATAGCTCTCATGTCATCTCATCCATGTTATTTTGCAACCCAGTTGGAATTGATAAAATCTGAAGATTTGTTTGTGTTGTTAGATTGCTGCAATAGTACTTGCTTGGCCTTACTGCACCTATAACAGTATGCTTTATCATCCGGTAAATGTGAAGGATTATGTTTCTCGCCTGCCTCAGGTTAATTGGCTCAAATGTGGACGACAATGTGGCAATTTGGTGGTTACAACTTGTTAAGCTATAGCTTTTGTTGTGAAAATTGAACCTTAAGTTACTGGTAGTGCAGTCAGTAGCATATTTGAGTACACATTTGGTTCTCAACTTCATGAACAATTTTCAAGAACAGAAACTTTGTGAAAGCACATAATCATCATGCATCTCAAGTTTGACACGTGATGAACTTTGTATTGTTCAGTATGATGAGGTTTTACTTGCAATTGCATTGAAATAAACCACACATTACCTGACAGAATCTCATATATTTCTAATGGAAACTTCCTGTCTTTATTTATCATGTG
SNP_position 436
allele_1 G
allele_2 T
ASP_primer_S GCGGGCAACTGGGTTGCAAAATAAA
ASP_primer_L GCGGGCAGGGCGGCAACTGGGTTGCAAAATCAC
Common_primer AGTCTCTTCAAGTTTCATAGCTCTC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 T T

Population Linkage Group Position
AL2010 E_04 44.9
LW2010 E_04 70.7
LWA2010 LWA_04 75.07
LWAE2012 E_04 73.486
LWF2_2022 E_04 92.5

DB Program Definition E-Value

EST Name Species Strain