+Marker Data: est_ae507m22

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 58.2
Annotation
Source Name AE507M22
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ACAACATAATGGACATGAATGCCG
STS_primer_rev TTCAACACTTCAACTCCATCTCGAA
amplicon_seq CTACAACATAAATGGACATGAATGCCGGACTTGGGAGGGATTTGGCAGCGGCACTAGACTCTCCTAAACTGTGGGTGATGAATGTTGTGCCAATTAATGCTGAAAACACTCTTGGTGTCGTATATGAGAGGGGTTTGATTGGTATATACCATGACTGGTACGTATCGCTAATGGTTTCTTATCAACTTTTTTTCTTTTTGCGCAAATAGTAAAGCATTTCTGCCTATCCACCTATCCTTGTTTTCAAGAATTCCAAAACCTTCTTCCCTTTATTTACTGAACAACTATAGCATCTAATGAGAAGATTCAAATGAAACATCCAAGACCTCCTATTATTTGCATGTTCGAGGAAAAATCAAGGTTTCATATTGGAGATATTATGTATGCTTTGGCAGTTGTCATTCTTCTGTTACTGTTTTGCACTTGGATAGTTGAGATTATCATTCCTAAAACTTGGACTAATTTCGGTTTTTTTCCTTCTTTCAGGTGTGAAGGCTTCTCTACATACCCGAGAACATATGACCTCCTTCATGCTAATCGCTTGTTCACTCTGTACCAGGACAAGTAAGCATTCTTAAACTCTTTAAAGAAATGGTCTATGCTATTGGATATATTAATACAGAAAAGAAAAAAAGCATTACTGATTCTCAAAGCTATATGATTGTAAAACAGGTGTGATTTTGAAGATATTCTCCTAGAAATGGACCGTGTTCTGCGACCTGAAGGATCAATCATTCTTCGAGATGGAGTTGAAGTGTTGAAA
SNP_position 94
allele_1 T
allele_2 C
ASP_primer_S GCGGGCCGACACCAAGAGTGTTTTCAGCATTAA
ASP_primer_L GCGGGCAGGGCGGCCGACACCAAGAGTGTTTTCAGCATTAG
Common_primer CGGCACTAGACTCTCCTAAACTGTGGG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_08 58.2
ALF2 AL08 71.6
LW2010 E_08 64.3
LWA2010 LWA_08 60.139
LWAE2012 E_08 60.385
LWF2_2022 E_08 74.2

DB Program Definition E-Value

EST Name Species Strain