+Marker Data: est_ae004c13

Crop eggplant
Population AL2010
Linkage Group E_07
Marker Type SNP
Map Position 69.2
Annotation
Source Name AE004C13
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd tgggacacatatagctgttgggaa
STS_primer_rev tggaatctggtgaactgaccg
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTGCTTCTAGATATGTATGTGGTGAAAATGTATGCAGACACAGAAATGCTACATATGTATTACTCTTCGTCCTCTTTCTACTGCATGTATATCGTTCATATTTTATGATGATGAGCTTTATTGGTGATATTCTGTGGAGTTCCGCACTATCTGCCTATTATGGAAATTAAGTCGGTACTCTTATTCAGCTGTTATATGGTGCAGGATGATGAGCTAACAATATTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAATTTAATTACGAGGTAGTCTCTTCCCCAGCTAAGTTTAAGGCGATTCATAAGCCCATGTAGCAGGTTATCAAAAGTAATGTAACTTGAGTTGTTATGCACGGGGTTTAAGCCTACTGCATTTGGTCTGTCTTCTTCTCCTACTGATGGCCCTTCCTTTTGTATTGCAAGTGTTTCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTGACTTTTATCTGCTGTGGTATAACTAATTGTCGAAGTAGGGTTCTGCTGCACATTCTAAAAAAGGACTTGAAGTTGCAGAAACATCAATTTTTCTTCCTCTAAGTTTTGATCTTTTCTTTCCCTCCAAGGGGGTAGAGACAATTACTTGTTAATGCAGAAATATCATGTGTGATGCGTGTATTTCTCTCATAACTGGCTGTTCTTGTGGTATTAATAAATAACCATTTCCTCTTAAATTTAGAGTTGTTCTTNNNNTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGTTGTTTTGTTGGCATTCAGGAAGAAAAGGCTTGAATTTCCAATATTTACTCTTGTTAATGTCAAAGTTCTTCTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGACTCTACAACCCGTTAACACACTTAATGCTCACACAGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTATTTTCCTGCAAGTATATGCTACCTTTGTGATGGTTTAAATTAAATTCATGTCTTCTCAGACAGCTTAAAAATATGTGATATTCCTTTCTATTAATTGGAGAATTATTTGGTGCTAGATCTAAGTATCTAGTAGCTTCTGTAGCACTACTGTAGCACTGTGGCTCAGGGTCAGGGTCCATGAGTTGGGATTTTTTATTCCTCTAAACTAATAATACTTGTTTTGATTCAATATTGCCCAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTTAGCCTTTGGAGCATTAAGGAGATGCTATGTCTTCGAACATTTACGAAACTCGAGTAAGTTCTCAAGTATGGTTTTTTGTCTATTTTGCTGGGGACAAACATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 1334
allele_1 A
allele_2 G
ASP_primer_S GCGGGCTTACTCGAGTTTCGTAAATGT
ASP_primer_L GCGGGCAGGGCGGCTTACTCGAGTTTCGTAAATGC
Common_primer CCTTTGGAGCATTAAGGAGATG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 C C
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_07 69.2
ALF2 AL07 82.6
LWA2010 LWA_07 93.291
LWAE2012 E_07 89.595
NAF2 NA07 113.0

DB Program Definition E-Value

EST Name Species Strain