+Marker Data: SOL8590

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 67.9
Annotation
Source Name SHT04B05C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tcttgggtcaactatttcatgggg
STS_primer_rev ttccttcacaacatgccagctatc
amplicon_seq CCTCACACTCCGTTCTCTGTTAAGGTCATACTATATGCTTTTACTAAAAAAAANTTAGGTCATTTTNCTTTAAAACTTGCTTATGGTTATTCCCTGATAACGAAGCTTTGAGCATGTTTCAGGTAGAGAATATGTGGTCAGGAGGCAAAAACGCTGGTTTGCTTGATCGATTTTCCTTAGTAATCCCCTTTTGTCTCGATTACATCAAATGTGAGTTATTCTTTTGACTTTCTAGTTTACATTTCAGTCAACCTTTACTGGGTGAATAATGGATTAGTTCAGTTGTACGTAGAATGCTGTGTTAACAACCTGTATGGTTGAATGATGAAATTTGGGGCAGGGGATGTGATATACAATGCTGCGTATCCGTTAGCAGCACCTGATGTTATATTTGGNN
SNP_position 257
allele_1 A
allele_2 G
ASP_primer_S GCGGGCACTGAACTAATCCATTATTCACCCAGT
ASP_primer_L GCGGGCAGGGCGGCACTGAACTAATCCATTATTCACCCTGC
Common_primer CATCAAATGTGAGTTATTCTTTTGACTTTC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro G G
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_04 67.9
LWA2010 LWA_04 98.237
LWAE2012 E_04 95.976

DB Program Definition E-Value

EST Name Species Strain