+Marker Data: SOL8554

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 64.9
Annotation
Source Name SmFL08A05A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ccgctatcttccatgaccggat
STS_primer_rev ggtggtatgctcatgaactcgtca
amplicon_seq CCGCTATCTTCCATGACCGGATAAAAGGAGTAAGTTTATAAAGAAATATTTTTTTGCCAAGTTTTCCTTCTTTGATATTTCGCTGTGTTTGTACAAATTGGAGAAGCTCATGTTTTCTGGTTGTCCTTTGAATTTTGCAGTGGAAATGCTGTGATGTTCATGTCAAAGAATTTGACGAGTTCATGAGC
SNP_position 48
allele_1 A
allele_2 C
ASP_primer_S GCGGGCAAAAGGAGTAAGTTTATAAAGAAATA
ASP_primer_L GCGGGCAGGGCGGCAAAAGGAGTAAGTTTATAAAGAAATC
Common_primer ACAGCGAAATATCAAAGAAGGA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 C C
Nakate Shinkuro A A
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_12 64.9
ALF2 AL12 77.2
LWA2010 LWA_12 66.354
LWAE2012 E_12 66.128

DB Program Definition E-Value

EST Name Species Strain