+Marker Data: SOL8540

Crop eggplant
Population AL2010
Linkage Group E_01
Marker Type SNP
Map Position 14.6
Annotation
Source Name SmFL07F16C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tcatatttactcttggcgcactgct
STS_primer_rev tgatccaaaacagtcccagttcct
amplicon_seq TAGGTATATCCAATATGATTAGAAAATAATATTTGTATTCCATAGTTTATTTGCCACCAACATAAAATCGTAAGATCAAGGTAACCAAGAAACTAGATGGTCAAAGTGATTCAGGCATAAGCAAGATCAAAATTAAAATAACATGCCAAAGCGCAAACACTTGGATAGCACACAACTTAAAAATCTTACATGATTACCCTGCGTCCTGCATTTTTGAAAAGACATATCAACCGCTTTGCATGTGGAAACACAACGCCCCATTTCCTTGCCTACTGTAAATTGAACACTTGTCTATTTGAGTTAGTAAAGCATCTAAGCTAATGAAATTGCTATACCAACAAGATCTTGGACACATTTGTCAATTTTAGATACAAGATGTCAACCCATACACTGTTGTTTATGCCTGAGAAAGAATAGACAAGGGACACAACTAAGGGTGTGGTCTAGTGGTCAATGAAGCGACTTGAGAACCATGAGATATCAAACACAAATCCAAATGGAGGCAAAACCACTAGGTGAATTATTCTCATGTGTCCAAGCCTTGATGGACAAAGCAAGGTACCTTGTGGAATTAGTCGAGGTGTGCAAGCTGGCTCAAGACATCGCGATTGTTTAAAATCGTGGTGTATTTGCAGGAAACGCTGTCTGCAGTTGCTTTTG
SNP_position 603
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTGTGCAAGCTGGCTCAAGACAT
ASP_primer_L GCGGGCAGGGCGGCTGTGCAAGCTGGCTCAAGACAC
Common_primer GCAGACAGCGTTTCCTGCAAAT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_01 14.6
ALF2 AL01 9.5
LW2010 E_01 10.0
LWA2010 LWA_01 11.157
LWAE2012 E_01 12.131
LWF2_2022 E_01 189.2

DB Program Definition E-Value

EST Name Species Strain