+Marker Data: SOL8282

Crop eggplant
Population AL2010
Linkage Group E_11
Marker Type SNP
Map Position 29.7
Annotation
Source Name ROT02G05C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ccgttgtttgtgacttggaagaaa
STS_primer_rev tgtggcgcttctccttgtgttatag
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTATGCTCTGACAAGGTAGATTGCAATTGAAGTTCCCATATTTGAAGTACTACTTTGTTTTTTGAACTTTTTGCCATATTGTTACCTGTTTGTTTGCTAATAAATTGAAATAATATTAAGATAATCGAGCTTCATTATGTGACAATACTATTTGTTGACTTGTTTTTGTTGGATTAATTTTCTATATTTAATTTATTTGATACTTCTTGGGCGTCTGAAAACNNNNNNNNNNNNNNNNNNNNNNATTATACTTNNNNNNNNNNNNNNNNNNACTNNNNTTGTAACCCGAGCAAGATATCAAATGTTNGTTTGCACTNAAATGGANTNNNNNNAGATNTTTNNTGAAGCTTAANTCNNNNNNNNNNTCCTCNATTTCTCCCTNTNGAGTANNNNNNNNNTAAATCANNNNNNNNNNNNCATTTTNACATTTTCTNNNCTTGTCTNNNNGTTTTTATTTGATTTNNNACCGTAAGTTTGTTNCTCTTTNTTGGGTNNNNAAGTTGGTNNNGATTGTTTGGTGTGTNNNTTCTCATCAATTTTGNCATAATCAAATGAGAAATTTNNNNTANTANTATTTTGTNNNNNGAAATGTAATTNNNNNNNNNATGTAGGNNNNN
SNP_position 147
allele_1 A
allele_2 T
ASP_primer_S GCGGGCACTTTGTTTTTTGAACTTTTTGCCATT
ASP_primer_L GCGGGCAGGGCGGCACTTTGTTTTTTGAACTTTTTGCCATA
Common_primer TTTCAATTTATTAGCAAACAAACAGGT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_11 29.7
LW2010 E_11 29.5
LWA2010 LWA_11 29.823
LWAE2012 E_11 34.649
LWF2_2022 E_11 34.6

DB Program Definition E-Value

EST Name Species Strain