+Marker Data: SOL8213

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 57.9
Annotation
Source Name PLA07N04F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd cgtgttgtccttcaggaaggttct
STS_primer_rev cctaaagtggccagtggagttttg
amplicon_seq NNGCTTTGCTTTATAAAAGTTGGCTATTCAGATTGCTAAGTACAATTGCAGAAAGTAGGATTGCATTGTTCTTGTTACCATGAAATTAGGTCTTGTGATAACATTGTTTTTCAGTATTTTTTGTAGTCACAGTGGCATTTCTGTGTTTTTGAATTAGCTTCCGTTTGGTCATAGATTTTGAAGTTGAAACTTGAAAAATTGAGTTTTTGAAGATGTGAGTTTTTGGAATTTGAAGTGTGAGATCTAGAAAACCTAATGTACCTTAGTTGCCAAAGTGATTAGTATTTGATGAAATGGATCAAGAGTCGAATGCTTGCAGAAGCTTCATATAGCCATCCCAACTAGTTATTCAAGTTGGTAATGGTCTCTAACATCTGCATTAGGTGATATGTTGCTCATACGTGACACAGGTAGCCAATTGGTTTACGAGGTTTGATTCTCATGTGTCTTATTAGAAGTTACTGGTTGCTGAATTATTCACTTTAAATCAGTGTAGATAGCAAGCTTTAGGAAGGCTTATAGTACTTCATAATGTTCTGTGAAGAATTTCATATATCAAGGGACAACTCTGTTATAGTGTATAGAGATCGTAAAGAAGGAAATCTGGCCTTGAAAAGCAAATAGAACACAGAAGCAGGAAGCATAACCAATACCTTTTGAGTTTTCTAGGAAATGAATGCCTAAAATATCTTTGAGGATCATTGATGCATAACAGAAGATGACAAGAACAGAACTTCTCCGTTGCAGTCAAATTATATAAGTAGGATGTTCTAAGTTAAAATAAAGAAGTAAACTGTGTTTAGCAGACTTGAAAACTCTAGGGATCCAAAAGGTGTGTGAAATTGTCACTTTTTCTGATGTTTCTATGTGAATAGAAGTGTTAAAATATTTTTGGATAAGAACCACTAAAATAGGTATTTAATATTCGAGTTCTCTGATTTTATATACTCAAGGCCCGGTGAAGCAAGTCATCAACATTCTGATTAACACTGCCTGATTTTTTTGTATTCATTGCTTTGTTGCTTTTGAGTTTTCTCGAAACAGCCTCTCTATCTTTATGAGGTAGTGGTTAGGTCTGGGTGCATTTTTCCCTCCCCAGACCCCATTTGTTTGATTCCACTGGGTATGTTGTTGTTGTTGTTTGCTTTGTTGNNNNNNNNNNNNNNNNN
SNP_position 392
allele_1 T
allele_2 A
ASP_primer_S GCGGGCTGGCTACCTGTGTCACGTATGAGCAT
ASP_primer_L GCGGGCAGGGCGGCTGGCTACCTGTGTCACGTATGAGCAA
Common_primer TGGTCTCTAACATCTGCATTAGGTGA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 T T

Population Linkage Group Position
AL2010 E_04 57.9
LWA2010 LWA_04 88.276
LWAE2012 E_04 85.998
NAF2 NA04 111.8

DB Program Definition E-Value

EST Name Species Strain