+Marker Data: SOL8182

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 84.5
Annotation
Source Name AE507O18A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd gcgataattgggttgtggatgaat
STS_primer_rev cccttcttcatcaacgtatcctgg
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNTGTTCAATCAACTTCTTCCTACCATGCCTTGGAACTCTGTTATGGTTAGTTTTCAATTACCTACTTAATTTCATAATTAATTAATTAAAAACTTGATTTAACTGTAATCTGCTCTGTTTTTTAAACAAATTACAGGATAGGATGATGAAGGAACTTCATGAACAAGGCAAAACAATTGAGGACATTGAACAAGTACTGAAACGGGCACCTGTAATTCCCCGGGTTGTTCCCGCCATTAAAGCAGCTCATGCTTTAGGGTACGTATCTATGTCTTTTTTTTTTTAAGTTTACACAATTTCTATGATTTTTGGTTCTAAAAATTCGATTTACTGAAATTAAATGCTCGCTGTTGTTTCAGGTGTGATTTGAGGATTGTAAGCGATGCTAATCTCTTCTACATTGAGACGATTTTGAAACATCTGGGAATATATGATTGCTTCACGGAGATCCACACAAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 428
allele_1 G
allele_2 A
ASP_primer_S GCGGGCAGCGATGCTAATCTCTTCTACATTGAA
ASP_primer_L GCGGGCAGGGCGGCAGCGATGCTAATCTCTTCTACATTAG
Common_primer TCTCCGTGAAGCAATCATATATTCCCA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 84.5
ALF2 AL03 90.6
LW2010 E_03 110.3
LWA2010 LWA_03 112.447
LWAE2012 E_03 116.875
LWF2_2022 E_03 127.7

DB Program Definition E-Value

EST Name Species Strain