+Marker Data: SOL8145

Crop eggplant
Population AL2010
Linkage Group E_10
Marker Type SNP
Map Position 10.0
Annotation
Source Name SHT04K22A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd gcatgtgcttcggaagacctttat
STS_primer_rev ctttgctccagcaataacacatgc
amplicon_seq AATCGTGCCTGGGCCATTATATACTTCATATCATCATGGTGCGAATCTCATTATTGCCCTTCTTTGACATTTATGTAGAAGTCCTGTATAAATTACATTGTTATGGTTATCCATCAAAGATCAACATCAAACTATCTTCTGCTGGCATATAGATATGCATGGTTCTGTCCATTGACATGTTATAATGTTTGAAAAGAAAATCAGATCACATGTTTGCTATTTCAGGAAAAAAAATCCGTTTATCTGAATGCTGATCTCCAATTAGATTGGTTGATGGTGGATAGCCATTGAACATTTGGACTTTTTACATCATNTTTACTCTTTTACGCTCTTGATTTGTCATCAAGTTATTGGCGTCACCTTACAAATCTTTTCTGCCAGTTTATTCTTAATGCTGATGATACCTTTCGGACTGCAATTTGTGGGTGATCCGTTAGATCTATTAAGCAGTATCCTGAGATTTTGCTATTTTTTCTGTAANCTATGTGCGAAGATCTTTAAAGGATTCATCCTACATTTATACATCTGCAGGCTAACATTCCTGGTTGCAGAAGCATGTGTTNNN
SNP_position 479
allele_1 A
allele_2 T
ASP_primer_S GCGGGCTCCTGAGATTTTGCTATTTTTTCTGTT
ASP_primer_L GCGGGCAGGGCGGCTCCTGAGATTTTGCTATTTTTTCTGTA
Common_primer GGATGAATCCTTTAAAGATCTTCGCACA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 A A

Population Linkage Group Position
AL2010 E_10 10.0
ALF2 AL10 0.0
LW2010 E_10 8.7
LWA2010 LWA_10 9.535
LWAE2012 E_10 12.885
LWF2_2022 E_10 9.4
NAF2 NA10 0.0

DB Program Definition E-Value

EST Name Species Strain