+Marker Data: SOL6026

Crop eggplant
Population AL2010
Linkage Group E_02
Marker Type SNP
Map Position 1.8
Annotation
Source Name SmFL17C09F
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CATTGGGCATTGCAGTAGGAAAAT
STS_primer_rev TCTCAAGTTGAACTCCAAAAGCTGG
amplicon_seq NNNGTGGGGAANGGCCCACCGGAGCCATTGACGCCCACCATATTGTCGTTAGGAGGAGTACAGAAAACGGTTTCAATTTATGCCTATTTGCTCTTCTACTTTTTGCCTATCCCACATTTCTGTTATTCCGGCAGGTAAATTGTACCCTTCCAACGTCAATTTCGTTTCAAATTAAACTTGTTTCAACCTAAAAATGAATATCTCTAATGGAACTCTTACTTCAGCTACTGCTGGTTTCGATAATATACTAGTAATTACTTGCGGTACCAATTTATTTTATGGGTATCTTCTGTAAACTGCATTTTTCCCCCAATTTGTACTGCCTCTCTTGCCACTTCACAGGAATTTATTATCAGGCTTGTTAATTGCAATTAGGAGTCCTCTTTTTCCTGTCATTACAAGGAAAAAGAAACGAAAAGTGTGGGATAATACTCACTTTTTCCATCCTGAGTAGCTTTAGNAATGACTATAGTATGTAGTTTGTGGTGGTTGATCCTTTTGGGGGTTTAAGTCTGTTAAATACCATATGAAGATGTTACTGTGCTCAAAACTTGGTTTATCTGAATTACTTGGTAAGAACACTGTGTCTAATTTGATGAAGGCCTTTTAATGCAAGGGAAGCTAGATACTCTTCATATTTGGAGCTTAGTTATCATGGTATTGCTTATGATATTATTTCTAAAGAAGCCAGTTAATAAAGGTAAGGAGGTTAGCTTCTATAAGTTTACTAGATGTACAGCTTATATTTTTAATCACATACATTAGTTCTTGAGCTAGATCGAAATGTAACCTGTTGAGTTGGTATGAAGTCCTTTAAGCTGGGAATCACTGCCGTTGCACGTTGTATTGATGCACATTGTGCAAGAANGGTCGAGATCTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTCACAAGTTCGTNGGTTGCACGTCTGCGTATTATGCATCATTGGTNNATTCTGCTCTATTTGGGATAATTTCATTAAATCTGGTAAAGAGATTTTNCTTCNAAGGCAGATTACAGATTCTCTNGAAANTAAAGGTTTTCTGAATCACCCTTACCCCTGAAAGGACATAATATTNAGTGTAATAAGGAGCAACTAAACCTTAATCCTAACTTCTTGCTATTGCTTATATAGATCCATTACCAAAATTATGTTATTCTTTATTAAGTTCGGACTGGTCCTAGAGCTTGTAGGTCATTCGAAGACAACTTCACTCCCATAGTTCTAGGTATACCTTGTCCTTCTTAGCACCTTCAAGCAACATAGTGTTGCACCTATGGACAAGTGCATTTAGAGGTTGACGTAAGACATGCCTAAACTATCTCAAACAATATTCTTACATTTTATNATCTATTTGTGCATTTGCGGTCTGTAATTAATGTGATCGTTTCTGGTCTTTATCTTATACGATCCCACGTCTATCTAGAAATCCTTATTTCTACCGTGCTCTTCTTGCGGATTTGTCTGGCCTTGAATTCCCAATATATCACCTCCGGTATCGTATTGCTGGTCTCACAGTTTTTCTACAAAACTTGCCTTTTACTTTGTCAGGAATATTCATATCACAGTGCAGTTAATGTACTACGTGCTCTCAAGTACTACTCCACTGAACTATCAAATTAGCGACTGTCTCTTAAGATAATGCTCAAATATTTTGTGGATGCTTTATTGATTTTAACTTCTTCCCTTAGAAGATGGAATAATAGAACACACTGGTATCATTTGGTTNCTGGGATGTATTCATCAACTTATATTTCANNNNNNNNCTTGTGTATCNNNNNNNNNN
SNP_position 306
allele_1 T
allele_2 C
ASP_primer_S GCGGGCCAAGAGAGGCAGTACAAATTGGGGGA
ASP_primer_L GCGGGCAGGGCGGCCAAGAGAGGCAGTACAAATTGGGTGG
Common_primer CTTGCGGTACCAATTTATTTTATGGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_02 1.8
LW2010 E_02 2.6
LWA2010 LWA_02 2.569
LWAE2012 E_02 3.283
LWF2_2022 E_02 13.8

DB Program Definition E-Value

EST Name Species Strain