+Marker Data: SOL5241

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 34.2
Annotation
Source Name CHX03C01C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GCAGGCTGCTGAAGACACTATGAA
STS_primer_rev GCTCAGCTATGGCTTCCTCAAATG
amplicon_seq ACTGCTCAGTACTGTTTGAGTTGACTTTGATTTCCTATTTTGCTGTATTTTTTAGGTTTTAAGTTTCATTTTTGTTTGGTGCTTTTTTACTGTTCAGATTAGGGCAAATTGGTTCTCGGTTTTCTTATTTACTTCTTGTGCTGGTAGGATTTTCATTGAGATCTGAAATGATATGTAGAAACTGTGGATGATTTCGATGTGAATGCAGAGAACTAAATTTAGCCATTCTGATCTGTATTTTATGTATTTGCGTTGAAAATGCAGTGGAGATTGCTCCATCGGGCTTGATTTTTCCTTCTCAGTTTAGTTTTTGTGTCAAATATTTGTATAAATAATCTTACTAATTTGGTTGAAATTGTGAGAAATGTATTGTTTAGCTGGAGGTTAAAGATGATGTGACATTTGGGACTTTGGGGTAAACTGCATCTAGGTCTGTCTAGTTACTTCTTGTAATAGCAAGATTTGTGTTAAGATGGTGACAAAGCATCTTGATTCTGTAGCTGGTTTTCAAGATAAATACAGTTTTAGCCATTACAATCTGGATTTGGTTCTTTTGTTGAGATTGTGGTGGAGATTCTTGCATTAACGTGTGCTGTTGAATTTTGTGCTGTGAATTTCTCTTCATTGCATATTTTTTTAATATGTTGTTAATTAGTCTTATGTGTTTTAATACTGCTGCTAAACATGCTGTTCCTTTGCATTATTATCCTTGACATTTGAAAGA
SNP_position 397
allele_1 T
allele_2 C
ASP_primer_S GCGGGCCAGTTTACCCCAAAGTCCCAAATGTCA
ASP_primer_L GCGGGCAGGGCGGCCAGTTTACCCCAAAGTCCCAAATGGCG
Common_primer TGTGAGAAATGTATTGTTTAGCTGGAGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_04 34.2
LWA2010 LWA_04 67.014
LWAE2012 E_04 66.39

DB Program Definition E-Value

EST Name Species Strain