+Marker Data: SOL5165

Crop eggplant
Population AL2010
Linkage Group E_03
Marker Type SNP
Map Position 46.0
Annotation
Source Name PER07K06A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ACACTGTAGCTGCTGTGGCTGATT
STS_primer_rev AGGAAGGTCTCCCATCCTTCATTT
amplicon_seq TTTGCAGGAGCTGGCTTCAGGTGTTTCTCTAATTACTGTTTGTTGGTGGTTTGGGTTCAATCTCTACTTTTAGTTCCGCTAGAAAACCCTCCCACCTCTAATAGCCTCCCCCTTCACCCTCGCCAAGCAACACGTAAGATGAACCTTGAAGAAGAAATTAAAATGGGAAGTCAAATTTTCATCCGTAGTTGTGATTTTTTCCTTATTGGAGGTATCTTGGCTCATTTCTAAGGATTTGAAAATGAAGTTGTTGGTGTGATTCACACGTTCAATTCCTTTATATTAATATCTTTTTTGGACTTCAACAGCATATGCAATGTAATCCCACTGTGGTGTCCTTGTGGACTTGAGGAATATAATTTTATAACGTATTATTTGTTGTTTCTGTGGTTCTCTCTAATTTATTTTTAACATGGTATCTTCATTACAGTTTTTCCTTTCCATACTTGAATTTTGATATGTTCTACTTAAGCTGATGGTCTATCGGAAACAACCTCTCTACCTACATAAGGTAGATCTTCTCCCTTGTTCTGCCCTCTTCCCAATAGGCCACAGGGGTAAGGCTGCATACACCACCCTCCCCAAACCCAGCTTGTGAGATTACACTGGCTATGTTATTGTATTAGTAAAATTTTCATCCATACCTTTGTTGAATTTTGTAGTGGTCGCTCATATGATGCCTGATCTTCCAAACGTTGGCCTTGAAAGAGACTTGGAGAGTTTCAAGGAATTCTTTGGAAGTCCTTCA
SNP_position 429
allele_1 A
allele_2 T
ASP_primer_S GCGGGCAAAATTCAAGTATGGAAAGGAAAAACA
ASP_primer_L GCGGGCAGGGCGGCAAAATTCAAGTATGGAAAGGAAAAACT
Common_primer TGTTGTTTCTGTGGTTCTCTCTAATTTAT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_03 46.0
ALF2 AL03 41.7
LW2010 E_03 71.2
LWA2010 LWA_03 72.475
LWAE2012 E_03 78.95
LWF2_2022 E_03 76.2

DB Program Definition E-Value

EST Name Species Strain