+Marker Data: SOL5055

Crop eggplant
Population AL2010
Linkage Group E_11
Marker Type SNP
Map Position 49.9
Annotation
Source Name MLF07B20A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TGAGCTTGATATTGTGATTCCCACA
STS_primer_rev GGTGCATCATAGTCAGGGATGTTG
amplicon_seq TGACATATCAGCTCTGTGGCAGCACCCTCACGCATACTGAAAGGATAACCACGAACGAAATCTGCCCCTTCTCTATACGGATCATACAGAGTGTTAAAGAAATGTGGGGTGGAAGGACATAGGAGGTTTTTTATGTGCTGCTCAAGAGCATTGATGTCTTTGCCAGATGGATCTTTGGCCACCTGCACATCAGCAAGCAACAAGAGTTCGGCATGTGATTAAATGATTGATAGACAAATCAAACTATCAGATATAGGCATTGGAACACCATTGTAAGAAGTGGGATTCAATCGAACCCCTTCGTCGGAAAATTATACTAAGCAAAGCAAATCCTTAGGAGTACGGACTAACGAGTACACCACAAATAACAACATAACCAATGAAATTCCACAAGTGGGGTCTGAGGAGAATAAAATGTACGCAAACTTTACCACTATCTAACAAGGTAGAGAAGTTATTTCCTGAAAACCCTCTTCTTGTAAGGAGTAAGGACTAAGGAGTGATTGGAAAAATTGGTAAAAGGTGCTACACAATTGCCAAATATATGGGCCTAATATGGAAGACTACCACTTTCCTCAGAAAGGAAAAGCATTTATTTTTAGAAAGGTTCCCATCATTGCATGGGACCAAGTCAATCAACAAAGATTATCACATACAAAACACTCGATTCCAAAAGGAGGTAACATGAATTGATGTAGCAAAATTACATTACAGGTAGCTTCAAACAGTTAGTCCAAGAAAAACA
SNP_position 383
allele_1 A
allele_2 G
ASP_primer_S GCGGGCCTCCTCAGACCCCACTTGTGGAATTT
ASP_primer_L GCGGGCAGGGCGGCCTCCTCAGACCCCACTTGTGGAAGTC
Common_primer GGAGTACGGACTAACGAGTACACCACA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_11 49.9
LW2010 E_11 53.3
LWA2010 LWA_11 50.852
LWAE2012 E_11 54.707
LWF2_2022 E_11 69.6

DB Program Definition E-Value

EST Name Species Strain