+Marker Data: SOL4177

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 39.7
Annotation
Source Name SmFL38N19A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGAGGTACTGGCTACATCGGAAAG
STS_primer_rev ACCACATTCAAGGGAAATGAGGCT
amplicon_seq GGCTCTGTGCTCCAGTTTATGTTGACTGATAAATAACACTTAGATGATCTAAATAAAGTGAAGAAGAGATCAAGGCCAGAATGCTTTACCTTGCATGTTCTTGAGAACTTGTTCCTCTGGTACATATATTCTTTCAAGGTTCTTTCCAGTTTTCTTCTCCCACAAAGATACTACCTCATTTAATGTAATTATATTGTGTCGAGGCCTGATATAGAGGATTTTGTTCAGTGTTTTTGTATCATCCACAGCCTTTATGGTATAGGTACCAATGTCTTCTTCCAGGTTAAAAACAGCTGTAGATACAAAAAGGAGTTGAATGACTGTAGGAAAACGTCGTTCAGCTACTACTAGATGATTGACGGATGTGTCACTCATTGAGCAAGGAATTATCCAATTAATGGGAAATTTAATATGTACACTTTCAAGAAAATATGTACTTTACTGCAACGTATTTTCTCATATGAAATTACCTTTAGTGTTGCCATCTCCTAGGATGACAACTTTGTCTTTGGGAGGACCTGCAGCTCCAGGCTGAGCCAAATTTGGAAGAAAATAACCAGCAAAAAAGAAATTGGCCACATAAGTGAAGGGGATTCCTTCAGCCTCAACAGCGCGGCGAATTTGAACTTTAGTATTAAATGCTGATTTAGCACGCTCAACAGCATGGACACGATCTACATCATTCCCAAATTCAGAGGGAAAGAATCTCTGAAAGCAAGAGGCACTTAGAAGAAATTATTTTGCTAATTCAACCAGTAAA
SNP_position 380
allele_1 C
allele_2 T
ASP_primer_S GCGGGCATTTCCCATTAATTGGATAATTCCTTA
ASP_primer_L GCGGGCAGGGCGGCATTTCCCATTAATTGGATAATTCCGTG
Common_primer CAGCTACTACTAGATGATTGACGGATGTG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 T T
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_12 39.7
ALF2 AL12 46.2
LW2010 E_12 44.9
LWA2010 LWA_12 41.585
LWAE2012 E_12 42.301
LWF2_2022 E_12 49.3
NAF2 NA12 35.6

DB Program Definition E-Value

EST Name Species Strain