+Marker Data: SOL4172

Crop eggplant
Population AL2010
Linkage Group E_09
Marker Type SNP
Map Position 110.8
Annotation
Source Name OVL04J02A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TTCTGTTGGTGGGGCAGTTAAGTT
STS_primer_rev TTTGTGTCAGAATCAGCATCCCAT
amplicon_seq GGGCTGATGAATCGCTGTAATTGGGCTGGTGGATTGCATCATGCCAAGAAATGTGAAGCATCTGGTTTCTGCTATGTGAACGATATTGTGTTGGCTATTCTGGAGCTACTCAAAGTTCATGAGGTTGTTTTCATTATTTCTGTTCTTACTCACTTTCCCACATGGATGTTGATTGACTGATTTAAATTCTTAGATGAACTTGGTCTGCACACACTTTCTCGCTAAGCACTTACTGTCTACAAAATTACATCTTGTCAACGAGCTATGTTGTGATTTTGTGATGATCAATAGTCGAGCTATTTTATCTAGTCTTCAGGAAAACACATTAAATAAAATCACTAGCCTCATTGGATTAGTTTAGTGAGTAATAGGTTGGACTCTTCACTTTCAATGCCATACCTGTGTCGACACAACATCGGTATGGATGTGGGATCCATACTGGGTTTGGTTGACTGATTTTGGATACTTTGACCAAAATCAACGAAGAAACTCGGGACAGATACAATGATTTCTGCAATCAAAATAAAAGCGATGGTGAAAGTGAAAAAAATGGAGTACCTTTTGTATAGAAATTCCTATGTTAGTCCTTTTCCTTATATCACCTTCGGAGATCAATATTTTTTCCTCATAATCCTTTGTAATTTGAAAAATAACTCTATTTTTAGTTATACCCGAGTACTCGTATTGGTATATGGATCCGTACCCCTGAACTTTAAAATTTAGGTCATGAAAGATTTGACCTCAGTATCATTATGCCCACACCTG
SNP_position 404
allele_1 G
allele_2 A
ASP_primer_S GCGGGCCACATCCATACCGATGTTGTGTCGAT
ASP_primer_L GCGGGCAGGGCGGCCACATCCATACCGATGTTGTGTCTAC
Common_primer GGTTGGACTCTTCACTTTCAATGCCA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
AL2010 E_09 110.8
ALF2 AL09 129.8
LW2010 E_09 101.4
LWA2010 LWA_09 107.137
LWAE2012 E_09 91.042
LWF2_2022 E_09 118.8

DB Program Definition E-Value

EST Name Species Strain