+Marker Data: SOL4122

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 17.6
Annotation
Source Name SmFL19K16A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TCCATTTAAGCTCATTGCAGAACG
STS_primer_rev GAACTGTTTGCTTCCAATGTGTGC
amplicon_seq GTGAGAGGGTTTTGAAGTGTTATCACTCCACCCAGGGTTACCTCCTTCGTAGCGCCAATTGCGCGCTTTTCATCGGATGTTCTCCGAATTTGGAAGTTCTTCAAAATCTCTAACTATAATATGGCTTGTATAATGAAGCACGGATCAAAATAGGGTTAAGTTTTCCATTTAAGCTCATTGCAGAACGTGACGATTACATCCATGCCCTTGTAGCATACTTCGACGTCTCTTTCACAAAATGTCACAAATTACTGGGCTTCTCAACAGGTCCACACTTTTGTCTTTGCATTTGCTTTTATTCGGAATGTTTTGACCCTCCCCAAAGAATTATTAGTCATTTGAGACCACGTGTATTTGTCGTTTCTGACCATGAGAAAATAATGATATGCAGGGCCTAAATCTCGAGGCACACATTGGAA
SNP_position 323
allele_1 A
allele_2 T
ASP_primer_S GCGGGCTATTCGGAATGTTTTGACCCTCCCCAT
ASP_primer_L GCGGGCAGGGCGGCTATTCGGAATGTTTTGACCCTCCCCAA
Common_primer GGTCAGAAACGACAAATACACGTGGTC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_12 17.6
ALF2 AL12 19.8
LW2010 E_12 14.5
LWA2010 LWA_12 16.558
LWAE2012 E_12 17.418
LWF2_2022 E_12 16.8
NAF2 NA12 12.6

DB Program Definition E-Value

EST Name Species Strain