+Marker Data: SOL4056

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 68.3
Annotation
Source Name CPA01F09W
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ATTGCTCAATCAACCTCAAGCTCC
STS_primer_rev ATTTGGGATCAATATCAGGCACCC
amplicon_seq AAAAATTCCTGCGTTGACTTTTTAGCTATCATAGAGAAGTCCGCATCCATTTGCTCTCGTGGCCATTTAGCAGGGTCAAAGAGAAACTCGCTGTAATTTGAATCAAAAATTAGTTTCTCTAATTGTTGTACTTACTGGCAGACAAAAAAGGAAAACAAGGGTGGAGACAACTATTTAATTACATCAGAGCAGAAAATATCTATTCATAATATATTTGGACAACGAGCAATTGTCTCGTAAATCAAAGAGTAACAATTATCAATGCAATTTATATGCTTTTTGCAGATATGGTGCACTTCAGCAAATAATCCAACCACCAACACCTATCACACACACTGTATTAGCCTTCTTAAACTCCAGCCCCACACATACCCACGAGCTCACCTGTGGCACTTCTCATTTTACTGTTCGCTCCAAACTATATGGTTGGAGGAAGATGTTTTTTTACACTAGGCTATCCCTCCCTTGTCTTAAAAGCACAATATTGTTTTTCAACTTACCCAAGAAGGAATGATTTTTGTGTGTTTTTTAATTTAATTTTTGTTTGTCTATATCTTCCGAAAACCTACCTAAGTTCAGAGATCAAAGATTGTACAACACCATCTTACGAGAACATAAAGTTAGCAATTTCATAGGGGCCTAAAAGACTCATGATGTTCCTTTAACTATTAGTAATCCCAAAAGACTCATGATGCTCCTTTAACTATTAGTAATCTATGGACTGAATAATCATAGTGACAGGGAAT
SNP_position 469
allele_1 T
allele_2 A
ASP_primer_S GCGGGCTTTTACACTAGGCTATCCCTCCCTTGA
ASP_primer_L GCGGGCAGGGCGGCTTTTACACTAGGCTATCCCTCCCTTGT
Common_primer TCATTCCTTCTTGGGTAAGTTGAAAAACA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_08 68.3
ALF2 AL08 79.7
LW2010 E_08 72.3
LWA2010 LWA_08 69.025
LWAE2012 E_08 68.747
LWF2_2022 E_08 83.3

DB Program Definition E-Value

EST Name Species Strain