Typing_Method |
Tm-Shift
|
Marker_Class |
SOL
|
STS_primer_fwd |
GCTCAAACAAGGCTGCCTCTAGTA
|
STS_primer_rev |
TTTCCCGACTCGTATTCTTGGATG
|
amplicon_seq |
TGCCCTAGGAACTTGATGAGAACGGAGAATTTGTCTCGTAAGTTTGAGCTACACCTTTTATTGCAAAATTAGGAGAACTTCTGGTGGAAAATTATGATGCTTAATCTCTGTTATGTATGTGAGTAGAGGTCATGGTTACTACTTTGCTCTGATGTCTTCAGTATTTACTTTATGTTGCCTACTTCATATGCTGGGATGGGCATGCAATATCTTCCTTTTATAATACTTGAGGACCATTGCATTTCCCAAAACACATTGCGTACTACTTCTGCATTTCCCAAAACACATCGTACTACTTCCTTTTATGTTGCCTACTCTATACTTGAGGACCATTGCATTTCCCAAAACGCATTGCGTACTACTTCTGCATTTGAAGTTCTCAATGATTTTAATGATCTTAAATCAATCGAGGAAACAATGGATTCTTTCTTGAGACTTGATCAAGTTCAAATTGACATCCTTTTGGTTCCCCCCTCTTTCTGCATCAATTACATCACTGAAACAGGACGACTTTACAAACTATAAATTAATAAAGGAAGAAACTGATTCCCTAGTAATCTCTATGAAGTTTCTCCTGGGCATAGTGTTTCACAGTGTCGTCGTTCCTCTGTTCTCTTTTCTTTCTATCTTTTGTTTCCTCTGATCAGTGTCTTGATATTTTAGTACCTGGGATGTTTTGAGCGGTTCTGCCTTTGTTGTAATGTTATTTTGAGCTTATTTGTCCCTAGTGTATACCACAATATCATTCTCCTTTAAAAGTATCCAATGTTGATGTTACTTTTGGTTTATGTTTTCAGATGAAAAGGTACCAACTGAACTGAAGAAAGCTATCATGCAAGCACGACAGGACAAGAAGCTGACTCAGGCTCAACTTGCTCAAGTATAATACCTCTTCATCACTTTGAATTCCACTCCCCAATAGGGAAAAAAAATAATGAAATGGATACATACATTGGTGATCGTTAATTTTAGGGAAAATAAATCTGATAAGCCCCTCTGTTTTTTGCAGTGATATGGAGA
|
SNP_position |
103
|
allele_1 |
A
|
allele_2 |
T
|
ASP_primer_S |
GCGGGCACTTCTGGTGGAAAATTATGATGCTTT
|
ASP_primer_L |
GCGGGCAGGGCGGCACTTCTGGTGGAAAATTATGATGCTTA
|
Common_primer |
CATCAGAGCAAAGTAGTAACCATGACC
|
enzyme |
Native Taq
|
dye |
SYBR Green I
|