Crop | eggplant |
---|---|
Population | AL2010 |
Linkage Group | E_10 |
Marker Type | SNP |
Map Position | 103.8 |
Annotation | |
Source Name | PLA04M09C |
Source Type | 16k_SmUnigene |
Source Sequence | |
Developer | NIVTS |
Document |
Typing_Method | Tm-Shift |
---|---|
Marker_Class | SOL |
STS_primer_fwd | CAACAATATGTCGGGGACAATTCC |
STS_primer_rev | AAAGTGGCGCTTCTTCTGAAGCTA |
amplicon_seq | CTGGCATCTGAACCTTGTTTTCTTGTAGTTCTCCTTTGTGATATTTCCTGATTATGTTCCAGTCATGTGTACGTTTTACATATGAGGGGGAAGAAATAGAAAGCTAATATTTTGTTATTTGCGCTACTCACAGAGTTCCCTTTTCTGCTTTGACCTAAATATCCAGTATCATTTTGACCTTAAATAGTTAGTGATCTCCTTAATGAAATCTCCCTCCCCCTCCCTTATTGTATATACCTAAACACATCTGCTTGTAGCGAATGGGTTATAGCACATTCCTCGTTGATTGAAAGTTTATTATCTGATCTATCAGGCGTCTGAATGATAACAAGCTGACAGGAATAATCCCCAGAGAACTTACCGGCATTTCTAGCCTGAAAGTTATGTAAGTACATGTTCTTTGCTTGTATTACTATTGTCATTCTTCTGCGAAATAGATTTTAAATTCTGCACTCTTTCTTCCAGGGATGTCTCGAATAACGATTTGTGTGGAACAATTCCCACTTCTGGTCCATTTGAGCATATTCCATTGAACAAGTAAGATTTCCTTGTATATCCTACAAATATTGTTATCAGAGTTGAATCCAGGAGTATTGAGCAATGCTGCAAATAGTAAACATGTCTTGTATGCTTTATTCTATCAACTTCACCTTTAAAACAGGCTATCGATCAAAAAAGGTATTCCTTTTAAAAAAGGATCTTCTTGATTTGTCTTTATTCAAGTTAAATTTGGGGTTCATAATAGGAACAAA |
SNP_position | 224 |
allele_1 | C |
allele_2 | T |
ASP_primer_S | GCGGGCTAATGAAATCTCCCTCCCCCTCCT |
ASP_primer_L | GCGGGCAGGGCGGCTAATGAAATCTCCCTCCCCCTACC |
Common_primer | CCCATTCGCTACAAGCAGATGTGT |
enzyme | Native Taq |
dye | SYBR Green I |
Line | allele-1 | allele-2 |
---|---|---|
AE-P03 | T | T |
LS1934 | C | C |
WCGR112-8 | T | T |
Population | Linkage Group | Position |
---|---|---|
AL2010 | E_10 | 103.8 |
ALF2 | AL10 | 129.1 |
LW2010 | E_10 | 90.1 |
LWA2010 | LWA_10 | 90.676 |
LWAE2012 | E_10 | 98.18 |
LWF2_2022 | E_10 | 93.1 |
NAF2 | NA10 | 93.1 |
DB | Program | Definition | E-Value |
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EST Name | Species | Strain |
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