+Marker Data: SOL3049

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 0.0
Annotation
Source Name AE503A10A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GCCAGAGGGAATAACAGCTGAGAA
STS_primer_rev ATCCAGCTTCTTGTAATGGCCTTG
amplicon_seq NCATGGACACTCTTTCTGATGGTGCACCGAAACATAAATCTTCATCATTCTTTCAAGAGGAAAGTGAAAGCTCTGTTACTACTCAACTCAATAGGCTATTTGGACGTCAGAAACCAATCCACCATTGTTTGGGTGGAGGCAAATGTATGGTAGTTTATTCATTATCGTCTTTATCTCATTATGGCTGTATAGCAATGCTCAATATGTTTCCTTGGATTTGTAGCTGCTGATAGCATGTTGTGGAGAAATAAGAAAATTTCAGCCACCGTTTTAGTCAGTGCTACAGCCATCTGGGTGCTATTCGAGTGGCTCAACTACAATTTTCTTTCACTTATGTGTTTTGGTCTGTCCTTTGGTCTGATTGCGCAGTTTCTGTTGAAAAATGCTTCTGGGGTAGTAAACAGGTACTTTTATTACCCGTGACCATCCATTGTTTATTATGCATAGGTGATCACGCTATTTTGATGATGTTACTGTCCCTTGCCTGTATCTTCTAGACTAGTTCCTATTAATTTTCTCTTAACACGCTGAAGTATTGAATATTTAAGGATATCAGGATGCAAAATTGCAAACAAACAAGTGTTGAACGCCGTCTCCCAAAGAGTGTCCTTTTTCGTCTACTGTATTGGTGTAGAACTTCATAAACATTCTGTTCAAACACGGTTCACTATAGTTAGTCTCTTTTCCATTTTTATTCATCTCTTTCTGCTCCGTATATGCTTTGATATATAACTTAATTTCAGTCGAGGCAGAGTGAAGTTTAATGTAGNACTAGCTGGNAGTCGTGGGTCTAGTTATGATACCTAAATTNCTGAATATATCTGGCATAACAGACTCCGCGGAACATAGTTGAAGGGGTTTAGNTTACCCAAACTATTATCGATAGAACGAGAAANCCAAAATAGTGGCAGGTTGTGTATTTTCTAAAGCAATGTTCTCTTCTTGTCTTTGTNATTCTAATTTGTGTATTATATATCACTATCTTGAATCAAATTAACGGCAGTTCATTCTATGGCNNNNNNNNNNNNNNNNNNNNNNNTGGNTTGGGGTTCCTTCAAGATGCTGCCTTGGGCGGTAACCTGAAACAATTTGTAGTGGTATGCTTAAAGTCATTAACCATTCATATCTATCCTCAGTGATATGCTTACAATAAAATGATACAAAGTATCAATTACTTGATGTGAATTATGTGGCCCTTTCTTTGAACGTTGTAGCCTTTTTATTTGATTATCTTTTCACTAGGTATGAGGTGTGACATAAGTATGAACTGTGTCCGATCATAGACCACCAGGCAATACAAGGCTAAGTGACTTAGGTTTGCTTCTATAGGCTAATCGAGATGGAATTTCCCTTTGAAACTCAATTACGAGATCCCAAGACTTGTGCCATTGTTTGTTCAATATTATGTTCTCGCCTTACTTATTTTCATGATCTCTACTGAGATTTTCGAACTAAGATCCATAAATTCAAAGCTCTGATCACCAAATTTTCTTGCAGCTGTTTGACATCCCCCCTCACAAAAAGACTTTTCCCAATTTCAGATGAGATTTTTCCATGTTTACATCTTCTCTCCTCTCTATGATGTCAAATTTCTTTTACTGTAAAGTACACGAAGCTAATGTCTTGGGATTTGTCCTAGGTTATACTGAGCTTGTGGGCTGCTGGTATGATAGGAAGCTGGTGCAACTTCTTGAGTGTTGTGTATATTGGTAAGAGCTCTCTTTTCCATGATAGCGTACTACCATTTATCTTCGAGTATCAAGCAGGGGAGATCATTTCATTCTACAGATAGCAATTTCATACTGAGATGAAGATGTCTAACGTAGGAGTATCAACGTCATCATGTCACTTATAGATACAAATATGCAANTAATCTTGTCTCCAGAATTGTTGCCACACTCGTGTCTGACATTTTTGAAGAGTCATATTGATATCACCGTGTCAATCCCGACTAACTTTGAATTTTGATTTATAAGGATTCGTGGCTGCTCACACTCTTCCAGTGCTATACGAAAGATATGAAGATGAAGTTGATAGTTCGTATACAANN
SNP_position 1778
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTCGAGTATCAAGCAGGGGAGATCATTT
ASP_primer_L GCGGGCAGGGCGGCTCGAGTATCAAGCAGGGGAGATCAGTC
Common_primer CTCCTACGTTAGACATCTTCATCTCAG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
Nakate Shinkuro C C
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_12 0.0
LWA2010 LWA_12 1.371
LWAE2012 E_12 1.38

DB Program Definition E-Value

EST Name Species Strain