+Marker Data: SOL2049

Crop eggplant
Population AL2010
Linkage Group E_12
Marker Type SNP
Map Position 44.0
Annotation
Source Name SmFL31O08C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGACCTCCGCAACAACTATCATCA
STS_primer_rev GAATCCATTTCAGGATCATAGCCA
amplicon_seq NATCATTGATAGGTTGGTAGTTACGTTGCTGATTTTTGTACTTTCCTTTTCTTCATCCAATTACCTGAAGAATATATTATTTCCCTACAGTACGAGCCAAGAGCCATTATCTAGACCATTCCTGTATAATGAGAGCTGTCCTGATGCTTTGCCTTTGGTGAAGTCTATTGCTCCTGCAAAACATACAGTCTGCTCTGGATCCTCTACACTTTGCAAGCTTGTCTCGTGGTGGAACTCTTATCCTTCAAGCAAGGAATCTGCGGTATTGTTACATCAAGCAGATTGGTTACTGTGGCTACTCCATGGAAAGCTGGGCGTGTCTGACTATAATAATGCTCTCAAGGTAACTCTTATAAACACCCACGTTCTATCTTTTCCCCTATGTGTCTACTAATGTTCAAATTTTTTTTTTTAAAAAAAGATGGTGCATAAAGGGTTGAAAATACCTCTCAATATTTTTATTGAGCATAGGAGGGCTTACAACTGCTTTGATTTGCTTGAGCCAAGGGTCATTTGGAAACAGTCTCTCTATATCGGAGAGGTAGTTTCAAGACCTGTGTGCACTCTACTTCCCCACACCCCACTTTGTGGGATTTGACGGGGTATGTTGTTGTTGAGGAGGGCTTACCACAAAAAATCAGCATAATACAAAATTCAAACAAACTAATCTTGTAATAGAAAATTTAAAATTCAAATTCATCCTAAAATTAGCAACTCATTATGCTAAAAACACAACTGCAGTAACTAAATTAATTGTCAGCAACTAAAACTTCCTTTTGTATGTTGCAGCTTNN
SNP_position 402
allele_1 A
allele_2 C
ASP_primer_S GCGGGCGCACCATCTTTTTTTAAAAAAAAAAAT
ASP_primer_L GCGGGCAGGGCGGCGCACCATCTTTTTTTAAAAAAAAACAG
Common_primer AAACACCCACGTTCTATCTTTTCCCCT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_12 44.0
LWA2010 LWA_12 45.957
LWAE2012 E_12 46.939

DB Program Definition E-Value

EST Name Species Strain