+Marker Data: SOL2040

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 30.5
Annotation
Source Name SmFL31M08A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CTTTATGAGCAGCAAATCGAGCAG
STS_primer_rev TGGCGTTGATAATGCTTCCTGAAT
amplicon_seq GAATCCATTGCGTATTCTGATCAGGTGTTCTTCATGTGTTCGTATATTGGAATCTTTGCACCACATGTATCATAAAAGCATGAAGAGATGGTGATCTGCATTCACTTATTTGTATATTGGTTTCAGATGATAATGTTAGAAGGTGCAAAAGCCACAACGGAAACTGTTGATGCTTTAAGAACCGGAGCAGCTGCAATGAAAGCTATGCAAAAGGCAACGTAAGTTTCATATGCTGCATGCTCAGTGCTATTTACTGGTGTGTTTTCTTCTTTAGATGGAGACATCTTCTGCAGAGGTAAACTTAAGAAAAGACAAAGTGGGAAATGAGAGAACTCCAAGTCAGGGCTTTCTGTCGATGCATGTTAAAACATAAAATTTACCTTGTAATTTTCTTTCATGATTTAAAAAGATATGATCTGTCATTACTGAATCGCCACAGCGGTCAGGACTTTTGTAACTTTTTTTCATGATTTAATAGATGTCAATAATCTTTAATTCCAAACACTTCATTTAATTATGAGTTGCCATATGCTATTTAAGCACGCACATGCGGTGTAGTTTTCCATATCACCCTCACCTATGCAACATGTTGTCTTTATGGCACTTGGGTGTTTCGGATTTGTAAGATCAATCTCCAATACTTGCTAGTAATTAGTTCGGTTCGTTGTTATGGTTTTTGTTCAACTCAGGGTTTTGTCCCTGATATAAGCTAATGTATTCTGTTTTCAGGAATATTGATGATGTCGACAAAACAATGGATGAGATAATGAGCAGACTGAGAAG
SNP_position 574
allele_1 T
allele_2 A
ASP_primer_S GCGGGCTGCGGTGTAGTTTTCCATATCACCCA
ASP_primer_L GCGGGCAGGGCGGCTGCGGTGTAGTTTTCCATATCACCCT
Common_primer ATCCGAAACACCCAAGTGCCATAAAG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
WCGR112-8 A A

Population Linkage Group Position
AL2010 E_08 30.5
LW2010 E_08 39.5
LWA2010 LWA_08 33.292
LWAE2012 E_08 34.045
LWF2_2022 E_08 39.8

DB Program Definition E-Value

EST Name Species Strain