+Marker Data: SOL1101

Crop eggplant
Population AL2010
Linkage Group E_08
Marker Type SNP
Map Position 58.2
Annotation
Source Name SmFL22A02R
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd AGGAGTGGATGCTGCCTGAGTTGT
STS_primer_rev GCACAACCCTTCCTTTCCTCTTG
amplicon_seq NNNNNTGATGATTAATTATNTATNGAGAAATTTTCAAAAATATACAAACTAATACAAAATATTGCACCATGTATCCCAATATTCAATATTATACAACACTATGAATGGGGAGAGTATTACACCTAATTATCAACCTTTGTATAGAAGTATATAATAGTGTATGAAAGGTGTATACACAATTATGGGCTAAACCAGGTAACAAAACCAAAATATGGGCTATGTGGTGTAAATATTTTTCTCCCGGTAGACATAGAACATAGAACTAATTTTCCAATGATTATATATTTGTGGATAACCTAATAATCCCTCCATTTCAAAATAAATAAATTGCTGGGGTATTGCACACCCTTTAAGAAAAGGATATTTAGACACTAATTAGACATTACTTTTCACTTTTACCCCTTTTAATTACTCCTTCAAAGTAATCAAAGTTTCTTGAACTCATAATTTGAACTACGAAAATGCCTCAATAATTCACTTATTTTGAAATGGAGGGAGTACAGTTTTGAAGAGAGATTTCTTTCGTCTATATGTATAAATGATAAGACATTATGATGTTGCAGAACATATGATGTGGATCAATAGGAACATTTTGTTGGAGTTGTGAAATCGTGCTTCTATAGCTTTCTATTTTGAATTTATCTGGATGAAATTTGGATTATATTGGGCTTAATCTACAGTGGGTCATGTCAGGAGGAATCAGATTGGATTACATTTCCTATTAATTGATTTTTTTTCGGTTTCTTCTCCTGCCTTGTTTTGCACTACACTCCCCTGAACACCTATTTTCAATAGGCGTTGTGAACTTCTTGAAGATTCAAGTTATTAGAGTTTTCATCTGATTTCTCTTCATAGTCTTCTATGAAGCATGTTTGGCACCTTAACTTGNAACAGTACTCCGTGTTGATTTTCTTGTTGATCTTGGTAGANCTAGTGCTGCTGGTTTTATATTCTTCGATAAAAACTGGAAAGATGTAAGTGTTCTCTCATTCATGACTTCACTTTCAANCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNGATGTTGGNCATGGTCCATTNGAAAGTCATGACTGACTGCGGGCTTGACCATATTCAGTATAAGATTNGTGGATACAGCAGAGTTCCAGTATAACACCGAGTGTCAATCCCAAACTTGTAGGGCTTAGCTATATGAGTCTCAATCCTTGTCTTAATCTTTTTTTGAGCTGAGACTTATTTGCCTTAATCTTCTCTGAGTCTTTCTCAATTTTGGCCGTTTACATGAGTTGCAGGCTCTTATATTCTTACTGGCCCTCACAGTAAGGGCAGCAAACAGACCAGCAGACTATGATAGTGATGATGAGTACATAGGTGGTCCCAGACAACAAATCCGACAGCCACTGATCAACAATAGGGCACCAGCAAATCCTGCAACTGGTGTCCCTGTTACTGGTACCCTTGATAATCGTCCAAGTAGAAATGATGCATGGAGTACACGTATGAGGGAAAAGGTTTGCTCTCTGTTAATTGTTTTTTCTTGCATGTTGATGTGGATCATGATGTTTAACCTTCTCAGTTGACTGCTTGTTACCAACTGCACAATCTTCTTCAGTTACTTTGAACTCCTCATGATGGTTTTCCTGTGTTTATTTGTGGTATTCTATTTCTTTTGACCTTTTCNCGGGACTTCTAGATATGATTTTTCTTTTCATTCTCTTATATTTTCAAAATATCCCGTCACAGCAAGACCTTTTCTTTGCATCACAGGACTTTTTTTGACCATGAGAGGATTTTCACTTTGAATGTCCTTTTAAGTTTTTTAAGAACTTCCATGTGACAGCATACGGATTATTGTTCCAGTAGTTAGTGCCAGTAGATTGGTATGGTTTTTATCTCGTCTACGTGCTTGTAACTTATAAGTGCACTTAAATTTTTGCTAGTCTGGTGAAACCTCTTTCCTGTTTAGTACTGGCTATTAAATTTTTTTTTCTGACTTGAATTCTTGAATGGCTGTAACCCAGTATGGGCTCGATACATCGGAGTTTACTTACAACCCATCAGAGTCAAACAGNNNTN
SNP_position 1608
allele_1 T
allele_2 A
ASP_primer_S GCGGGCGTTACCAACTGCACAATCTTCTTCAGA
ASP_primer_L GCGGGCAGGGCGGCGTTACCAACTGCACAATCTTCTTCAGT
Common_primer CAGGAAAACCATCATGAGGAGTTCAAA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 A A
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_08 58.2
LWA2010 LWA_08 60.258
LWAE2012 E_08 60.391

DB Program Definition E-Value

EST Name Species Strain