+Marker Data: SOL1040

Crop eggplant
Population AL2010
Linkage Group E_04
Marker Type SNP
Map Position 6.5
Annotation
Source Name SmFL14O07A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CTGAAGTTTGCAAGGTGCTTGGTA
STS_primer_rev GATCCAATTCTCACATTGGTGCTG
amplicon_seq GTGATCCAATTCTCACATTGGTGCTGCCCATTTCTATCTGCAGTGTTATTACAGGGAATCAACACATAACACGTCTACTTCTCTAAACAAGCAGTTTCCAAATGCAGCTTATATATTCTTAGAACACATATTTTTCATAATTCCATGCTCACTTCAGGAACAACACAGACTGTACAATTAGTCAACATACAAGGAAATCCAATGACAGAAAAGCAAAAAAATGAATTACATGGCCATCTTGAACAATTGCAATTGCTTCCGGAACATTTTTTAGTTCAAAATACGAGAAAAATAAGCCGAGGAGGAAGATATATTTTTGCATTAGCAAGCTAGTAGCATTAAATTAAACTTGAGGGAAATCAAGAGATTGACGAACCTCCTGCTTTCACTTGACAAAAGCATCAACGAAATGGAACTAGCAAACGAAATTAATCAGAAGTGATGCTCTCGATCAGAATCAATTTTTCTGGATGAAGAGATCAGATTTTTATGACTAGTATAAAAAAAGACCAGCTTACCGCTAGTTCAAAGTCACTAGACATGCCCATGGACAACTCACAGCGAGACTCCGCCATACCAAGCACCTTGCAAACTTCAGA
SNP_position 424
allele_1 C
allele_2 G
ASP_primer_S GCGGGCAGCATCAACGAAATGGAACTAGCAAAG
ASP_primer_L GCGGGCAGGGCGGCAGCATCAACGAAATGGAACTAGCAAAC
Common_primer TGATTCTGATCGAGAGCATCACTTCTG
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 C C
LS1934 G G
WCGR112-8 C C

Population Linkage Group Position
AL2010 E_04 6.5
LW2010 E_04 3.8
LWA2010 LWA_04 6.152
LWAE2012 E_04 5.437
LWF2_2022 E_04 3.5

DB Program Definition E-Value

EST Name Species Strain