+Marker Data: CSN293

Crop cucumber
Population CSRILs
Linkage Group 6
Marker Type SSR
Map Position 60.3
Annotation
Source Name 040785W
Source Type cucumber_genomic
Source Sequence gacctgcaggcggccgcgaattcactagtgattgtttagc cttgtagcagaagcctttgagcctcccctcaactttgaaa tctttttaatacATATATgtaactaaaataatagcaacag tggaagcctagagtttagtggtatgtagaactatctcttc caacctccttcaaactgatcatgttcaaatctcattcccc cttcaacaaaagtttagatccaccattaacgataaacacc gaatagtctcttaaaagcaatatacacGAGAGAaacaatt acatatttagatagtaatgcaactttgaatgtatcttttg tccataaggtactaagaacatagaaaggagtgtttgaata ggccggcacgAGAGAGAGAGAGAGAGAGAGAGAGaaatgg acatatagttataaaaatatgagaattaaaaagttgattg catgcattgtgCCACCACCATGTGTGttctttattctgtt tagattaaatgtaaagactttttttcaaaagcaaaaatga cttaaaagtgattctnnnnntgaattggtaattttgaaaa gtatgaaTGTGTGTGgataccttgaaaagttcattcaaaa ccccacTATATAaagttacaaaatagttaaattttcattg gtgaggtgtaatgttttggaaatgaaattgtgactttttg tggcagaaagggcagaaaatagttttttgaaaaaagttca gaatttccattagggatatacaaaaattattgaatggata ccaaaacaaaaaggttagtcaatgaagttgttagttcatg tttgaaggtgtcattaatttatttttatcaacatttaatg gcaatgttcttggatgttcaacattcaaatcttggacttt ttgttgttttaccctctagaagtatatgttgtttttgttt attacaacatccaaatctatagggttttgtttaattaatt aatacaatatttcaaaTATATAttattatttttatactat aacatgagtctttcggttcttcatgtgtactttaccttag gcttctgctacaaggctaaacaatcgaattc
Developer NIVTS
Document Fukino et al. 2008
motif (ag)12
PCR product (bp) 296
fwd primer CSN293-F
fwd primer seq. tcatgttcaaatctcattccccct
rev primer CSN293-R
rev primer seq. ataaagaaCACACATGGTGGTGGc
fwd primer_for postlabel CSN293-FA
fwd primer seq._for postlabel atttcatgttcaaatctcattccccct
rev primer_for post label CSN293-RA
rev primer seq._for post label tttataaagaaCACACATGGTGGTGGc
Line allele-1 allele-2
AR_5 288 288
Harukei3 288 288
Nou4 288 288
PI 291 291
Santou 304 304
hardwickii 304 304
Population Linkage Group Position
CSRILs 6 60.3
DB Program Definition E-Value
EST Name Species Strain