+Marker Data: CSN227

Crop cucumber
Population CSRILs
Linkage Group 6
Marker Type SSR
Map Position 40.5
Annotation
Source Name 020225C
Source Type cucumber_genomic
Source Sequence gcgaattcactagtgattgtttagccttgtagcagaagcc caatgcattagcctacgaAGAGAGgacccatcttagaacg gtgccagaggtctcgaaaattcacacctaactactgggtg gtattcacaagtcaattttgaaacaaattctaattccttc aaccacgttttaattttcttgaagttgatatttgattcgt tgacaaattatttatgttcagacgacttcaatatcaatca aaatgataaatgtaattttcatataaaaaagaagttaata ttgaccaagttatgttcaattgacattcaaacatactaat aatgcacgagtaatgtgtttccaattttcatacacaattg ttgtgctaatgttatttaatcatatagtttaaattatatt caataatttattagaatgacattttatccaaaaagaaaaa atcaacaccactgaatgaattacctttcttacgtataacg aagtttgaattcattttttaagagttttttttttttctat aatggtttagatattgtattaaatttattttCACACAtca actaaaatttttgagtttagtcaaataatttaaaacaaat gtgttatttccttctcaattaatattttgaatccacaaat gaggaagattaatagtaataggtgagaggatgatataaga gaaatatgaatagatgaagggaaaggaaggcaagataaaa tgtaaaaattgttcccatgtccataattaatacagtaaat tccacgaaatttgatgattacatattgtgaaatataaagg tatgtgaaacacaaaaatgagttggttataagctttttgc attattgaaataagtttgctaaactcccacgcatcaaact ttaaaagaccatatgcatcctttttaatTATATATATATA TGTGTGTGTGTGTGTGTGTGTGaatattttgaaatgtgaa acaaagaagaaaaagaaaaggttaagaaatagaaataatg aaaatgaatgggtcatttcggaaagattgtaaaataagtg ggaaatcaaaggctattatTATATAttaaaccccactttg gacaatattatccatttgctctccaCTCTCTggggcttct gctacaaggctaaac
Developer NIVTS
Document Fukino et al. 2008
motif (ta)6(tg)11
PCR product (bp) 256
fwd primer CSN227-F
fwd primer seq. gctaaactcccacgcatcaaactt
rev primer CSN227-R
rev primer seq. ccAGAGAGtggagagcaaatggat
fwd primer_for postlabel CSN227-FG
fwd primer seq._for postlabel gttgctaaactcccacgcatcaaactt
rev primer_for post label CSN227-RG
rev primer seq._for post label tttccAGAGAGtggagagcaaatggat
Line allele-1 allele-2
AR_5 256 256
Harukei3 249 249
Nou4 249 249
PI 263 263
Santou 261 261
hardwickii 261 261
Population Linkage Group Position
CSRILs 6 40.5
DB Program Definition E-Value
EST Name Species Strain