Crop | cucumber |
---|---|
Population | CSRILs |
Linkage Group | 3 |
Marker Type | SSR |
Map Position | 62.2 |
Annotation | |
Source Name | 010505C |
Source Type | cucumber_genomic |
Source Sequence | caacgcgttgggagctctcccatatggtcgacctgcaggc ggccgcgaattcactagtgattgtttagccttgtagcaga agcctgctttaaatagacagacacaaacatggcaaacacc agtacctctcgtacttgctaatgaatttctgaaattgaca tgacaggtccactccaggggcttACACACcagaacttaca ggttaaatttcTATATAtcttcaTCTCTCttctttaatat tgtggcgtgcagaattttaccttcgttttaataagatcat cttctcttcaaagattctaaaacctctgcggcaagaaact aacttttgcttctccattcaactatatctctttagacttc cactactgttctgctgcttagggaatctcacgtcgttttt gcttgttTATATATATAaaaacattgaattcttgaaaaat tgaacctgaacacaaatctaaaagagcaggaaatttctca actgtagaaggattctttttttTATTATTATtcttgaaat attgaagcagaacaaTATATATATATAtACACACACACAC ACACACACaTATATATATAtgcatgtattcttttttcttg gaaagaagagttcctggatatttgtgtttattaggtcttc tactagtagacaaaaagaatcttatacccgtaggtcgtag gcttatgctacaaggctaaacaatcgaa |
Developer | NIVTS |
Document | Fukino et al. 2008 |
motif | (tat)3tcttgaaatattgaagcagaacaa(ta)6t(ac)10a(ta)5 |
---|---|
PCR product (bp) | 245 |
fwd primer | CSN209-F |
fwd primer seq. | cctgaacacaaatctaaaagagcagga |
rev primer | CSN209-R |
rev primer seq. | agcataagcctacgacctacgggt |
fwd primer_for postlabel | CSN209-FG |
fwd primer seq._for postlabel | gttcctgaacacaaatctaaaagagcagga |
rev primer_for post label | CSN209-RG |
rev primer seq._for post label | tttagcataagcctacgacctacgggt |
Line | allele-1 | allele-2 |
---|---|---|
AR_5 | 231 | 231 |
Harukei3 | 227 | 227 |
Nou4 | 199 | 199 |
PI | 226 | 226 |
Santou | 244 | 244 |
hardwickii | 226 | 226 |
Population | Linkage Group | Position |
---|---|---|
CSRILs | 3 | 62.2 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
---|