+Marker Data: CSN209

Crop cucumber
Population CSRILs
Linkage Group 3
Marker Type SSR
Map Position 62.2
Annotation
Source Name 010505C
Source Type cucumber_genomic
Source Sequence caacgcgttgggagctctcccatatggtcgacctgcaggc ggccgcgaattcactagtgattgtttagccttgtagcaga agcctgctttaaatagacagacacaaacatggcaaacacc agtacctctcgtacttgctaatgaatttctgaaattgaca tgacaggtccactccaggggcttACACACcagaacttaca ggttaaatttcTATATAtcttcaTCTCTCttctttaatat tgtggcgtgcagaattttaccttcgttttaataagatcat cttctcttcaaagattctaaaacctctgcggcaagaaact aacttttgcttctccattcaactatatctctttagacttc cactactgttctgctgcttagggaatctcacgtcgttttt gcttgttTATATATATAaaaacattgaattcttgaaaaat tgaacctgaacacaaatctaaaagagcaggaaatttctca actgtagaaggattctttttttTATTATTATtcttgaaat attgaagcagaacaaTATATATATATAtACACACACACAC ACACACACaTATATATATAtgcatgtattcttttttcttg gaaagaagagttcctggatatttgtgtttattaggtcttc tactagtagacaaaaagaatcttatacccgtaggtcgtag gcttatgctacaaggctaaacaatcgaa
Developer NIVTS
Document Fukino et al. 2008

motif (tat)3tcttgaaatattgaagcagaacaa(ta)6t(ac)10a(ta)5
PCR product (bp) 245
fwd primer CSN209-F
fwd primer seq. cctgaacacaaatctaaaagagcagga
rev primer CSN209-R
rev primer seq. agcataagcctacgacctacgggt
fwd primer_for postlabel CSN209-FG
fwd primer seq._for postlabel gttcctgaacacaaatctaaaagagcagga
rev primer_for post label CSN209-RG
rev primer seq._for post label tttagcataagcctacgacctacgggt

Line allele-1 allele-2
AR_5 231 231
Harukei3 227 227
Nou4 199 199
PI 226 226
Santou 244 244
hardwickii 226 226

Population Linkage Group Position
CSRILs 3 62.2

DB Program Definition E-Value

EST Name Species Strain