+Marker Data: CSN116

Crop cucumber
Population CSRILs
Linkage Group 6
Marker Type SSR
Map Position 25.6
Annotation
Source Name 050465C
Source Type cucumber_genomic
Source Sequence ggccgcgaattcactagtgattgtttagccttgtagcaga agcaaaagttttgttcattttcatcatgtatacattgttt gtattatttatttgttgattccgtaacatggctcaaaata gaagtttgtagagATATATggtaaagtaacaagcatatta gtaaaaagatgtgcgttggaagaaagaaaggaaatgaaaa atggagggaaaaggaatacgcccgcaagaagtggaaaaAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGatgagtttga gttgtgacaaagggagaggacgagacaacacttgctccac atttcaacgctttcataaacataaaagaaaataaaaacTC TTCTTCTtgaaaattgtgtttcatttttagTATTATTATT ATTATTGTTGTTGTTGTTATATAaaagaaaagaaaagaaa agaaaaaaacacaaaaaaccaaaagaaagagaaAGAGAGa aagagaaagcaacaacacgtaaatgtcaaatccTCTCTCc ctatctctgccattttccaccacaccttctccactaactc aattatcatataattatatcatctcctcccaACACACtta cacttttttctttctTCTCTCTCctttccatgtttataaa aaatatagaagattaggttaaatatggatactccactact acaacgttacaaagtttgaatacttatatttatgtattag tggacttcaaaacaataaagtttaaatagttctgctacaa ggctaaaca
Developer NIVTS
Document Fukino et al. 2008
motif (ag)16
PCR product (bp) 152
fwd primer CSN116-F
fwd primer seq. gtgcgttggaagaaagaaaggaaa
rev primer CSN116-R
rev primer seq. atgtggagcaagtgttgtctcgtc
fwd primer_for postlabel CSN116-FC
fwd primer seq._for postlabel cttgtgcgttggaagaaagaaaggaaa
rev primer_for post label CSN116-RC
rev primer seq._for post label tttatgtggagcaagtgttgtctcgtc
Line allele-1 allele-2
AR_5 - -
Harukei3 - -
Nou4 - -
PI 150 150
Santou 161 161
hardwickii 150 150
Population Linkage Group Position
CSRILs 6 25.6
DB Program Definition E-Value
EST Name Species Strain