+Marker Data: CSN084

Crop cucumber
Population CSRILs
Linkage Group 6
Marker Type SSR
Map Position 72.2
Annotation
Source Name 060163C
Source Type cucumber_genomic
Source Sequence ggcggccgcgaattcactagtgattgtttagccttgtagc agaagccctccaacaaaaagcatatttgatgaatttagat acaagacagactatgatacgataattataaaggattaaga aatggaatgtgatgtaatctaaactaaactttgataacca attattaaaaaattgattaacagactaaaagtatttgagt tttaacctttaataaagatgagtttttatttattTATATA TATATATAgaaatgggagcgtaagtaagaaagggttaaat gcaaaacagatTCTCTCTCTCctctgctttgagataccaa aagcacttcggacaatccctcctttgtcactcactgtgct tccgacaattccaTCTCTCTCTCTCTCTCtttcattggta caaaaaaagctTATATATATAtgtACACACcaaaagaaaa aaagatgcttccctctgcaacaattgctaggctctaaagc aaaaaAGAGAGtctctaagttttgtgtaatgccatagcca tagccacTCTCTCttTCTCTCTCTCaaTCTCTCTCTCccT CTCTCTCTCTCTCttcttttgcttattacttacttctgga ctaatagcttctgctacaaggctaaacaatc
Developer NIVTS
Document Fukino et al. 2008

motif (tc)8tttcattggtacaaaaaaagct(ta)5tgt(ac)3
PCR product (bp) 123
fwd primer CSN084-F
fwd primer seq. tcctttgtcactcactgtgcttcc
rev primer CSN084-R
rev primer seq. tgttgcagagggaagcatcttttt
fwd primer_for postlabel CSN084-FC
fwd primer seq._for postlabel ctttcctttgtcactcactgtgcttcc
rev primer_for post label CSN084-RC
rev primer seq._for post label tttgttgcagagggaagcatcttttt

Line allele-1 allele-2
AR_5 125 125
Harukei3 125 125
Nou4 125 125
PI 132 132
Santou 130 130
hardwickii 131 131

Population Linkage Group Position
CSRILs 6 72.2

DB Program Definition E-Value

EST Name Species Strain