+Marker Data: es803TC4452

Crop pepper
Population KL-DH
Linkage Group KL04
Marker Type SSR
Map Position 93.15
Annotation
Source Name TC4452
Source Type misc cDNA
Source Sequence GCACGAGGCATCAATATTTTTCTCACACCTGCACACACCA CACACTTAAAAAAAAATTAAAAAATCAACAATTTTCTCAA AATTTTTCTGTGTTTTTTCATCTTTTTAATCTCCTCCCCT TCTGCATCATCCCGCTTCTTTGATCCCTTTCTGTCAACTA TCTGTGTTTTTTAAAGAAAATTTTCTGTGACTTTTGAGTT TGTGTTTTTGATGTTTTTTTGAACAAAAGAAATGAAGAAA ATGCAAACTTTTAATTTTTAGAAAAAGTTTTCTTCAAAGC CAGGTGTTTTCAGAATCGAGATCTAGTAAAATTAGTTCGG TATAGTTTCAAGTTTTTTTTTTTTTTTTAATTTTCTTTTT GTAAAATCAGCTTAGAGGGCTTTATTAGTAGTCCCTCAAA GTTTGATTAGGAGAAAAAGGGGTTGTTATTTGAAGACCTC TTTGTTGCTCTCCTTTTCTTTTGTTTATAGCAAAATCACT CACCTGTTTTCTCTTATTTGATAAGATTCAGGGTTGTTTT GTTTTTGTTTGGTGTGTCTTTTTAGGTAATGGCAGCAGCT ATGGATTTTTGGAATAGTACAGTACCTTTAGATCTTCAAT TATCATCAGATCCAGTTACTTCTGGTGGTGAACTTATGGA AGCACTTGAACCATTTATGAAAAGTGTTTCTCCTCCTTCT ACTTCTCCTGTTAACTTTCCTCCTATTTTCTCTTCTCCTT CTTCAGATCTTCAATCTTTTCCTTCTTTTCCTCCTCCTCC TCCTAATCCCATTTCTTATCCCTACACTTCTTCCTTTTAC CCTACCGTTCAACCTTCTGATGATTGTTCCACTTCCACGG AAATGAATTCCCAAATCTTTTCAACAGGGTTTTCCAGTTA CGGAATGGATCAACAATCGAGTTCAATTGGGTTGAATCAG TTGACACCAACACAGATCGAGCAGATTCAAGCTCAGATCA ACTTTCAGATCCAGCAACAACAACAGCAGCAGATGATGTC GTACCACCACCATGCTTCTTCTACCATGAACTTCTTGGCC CCGAAACCGGTTCACATGAAGCAATCTGGATCACCACCAA AGCCCACTAAGCTCTACAGAGGCGTCAGACAACGTCACTG GGGAAAGTGGGTTGCTGAGATCAGATTGCCCAAGAACCGA ACCCGTCTTTGGCTTGGTACCTTCGACACTGCTGAAGAAG CTGCTTTGGCTTACGACAAGGCGGCTTATATGCTTCGTGG TGACTTTGCTAGGCTGAACTTCTCCCATCTCCGCCACAAC TTTGGTGAGTACAATCCATTGCATTCTTCCGTTGATGCTA AGTTAAAGGACATATGTCAAAGCTTAGCACAAGGGAAGAG TATTGACTCTAAGAAGAAGAAAACCAAAGGGTCGGCATCG GCATCGGCAGCTACAGCTGCAGGGGTAGTTAAGATGGAGG AAGGAGAGAGCAAAGTTGTTGAAGGTGGATCCGAAAGTGA CGGGTCGGGTTCCGCGTCAGGTGAATCATCACCGGTAACT GAACTGATTTTTCCAGAGTTCACCGAGGAAGAATCAACAT GGAACATGTCTGAAAATTTCTTGTTGCAGAAGTATCCATC TGAGATAGATTGGGCTTCTATATAAGGAAAAAAAAAACAT ATTATTAGCTATTATTAAGTTTTAGGTCCAAGAGGTCTTT TGTATTTTTGCATTGTTTATAGTAATTGTTAATGGTGTTT CTAGGTGTTTAGGTCAGGGAACAGTCGGTCACTGCAATGG AGTTTTTGGCAATTGCAGGGCAAGTTCCTTTCTTGTTTTT AGGTTAAAAATCGTAACTGGTTTGGTCATGTTTTTTGTCT TGGCTAGGCCAGTGGATTTGATGCTTTGTCATGGTTGTAG TCTTTTCATTTTAGTGTCAATATTTTCTTTAGTACT
Developer Dana-Farber CI/Harvard SPH
Document
old source name pepper|TC4452
typing_method 13% PAGE
motif (T)13
PCR product (bp) 278
fwd primer
fwd primer seq GCCAGGTGTTTTCAGAATCG
rev primer
rev primer seq GCTGCTGCCATTACCTAAAAAG
PCR condition 95C_1min->(94_30s->55C_30s->72C_1min)x35->72_5min->4C
polymerase Native Taq
comments QV: estimated by sequencer
Line allele-1 allele-2
K9-11 280.6 280.6
MZC-180 (selfed LS2341) 284.6 284.6
Population Linkage Group Position
KL-DH KL04 93.15
KL-DH_2024 KL04 93.15
DB Program Definition E-Value
EST Name Species Strain