Crop | Chinese_cabbage |
---|---|
Population | AGF2 |
Linkage Group | 6_R1 |
Marker Type | SSR |
Map Position | 39.1 |
Annotation | |
Source Name | |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Suwabe et al (2006) Simple sequence repeat-based comparative genomics between Brassica rapa and Arabidopsis thaliana: The genetic origen of clubroot resistance.Genetics.(173) 309-319 |
motif | (GT)8(GA)39 |
---|---|
PCR product bp | 236 |
fwd primer | BRMS-339F |
fwd primer seq. | ATTGATTCCGTACAATGACGAGTCT |
rev primer | BRMS-339R |
rev primer seq. | TTCTGGAAAACGACAAATGACAAGT |
dye | NED |
PCR condition | 94C_3min->(94C_30s->55C_30s->72C_30s)x30->75C_7min->10C |
polymerase | rTaq(Takara) |
Line | allele-1 | allele-2 |
---|---|---|
A9709 | 236 | 236 |
G004 | 293 | 293 |
Kigokoro85 | 230 | 246 |
Kigokoro90 | 230 | 246 |
Muso | 230 | 236 |
Ka1-22 | 279 | 279 |
Ha1-400 | 237 | 237 |
Population | Linkage Group | Position |
---|---|---|
AGF2 | 6_R1 | 39.1 |
KHF2 | 6_R1 | 11.6 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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