+Marker Data: emg11N23

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SSR
Map Position 38.3
Annotation
Source Name emg11N23
Source Type genomic
Source Sequence NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCCTGCGGACACACCTCACAGGGC TTATTGGATTTTTTCTTAGTGCTACTACTGACAATAGGAG GAAGAAAACTTAAAATACGATCTGACGGATGGCCGTCGTA TGTAGTGCTTCACTTATTCTATTATATGTGTGTGTGTGTG TGTGTGTATGTGTGTGTGTGTGTGTGTTATATTTGTAATA TTATCTCCTACTCCATTTAAAAAAAGGTTTCAATTAGGAT TCACAATTATGAATTTTTAATTGTTTATAAATGAAGTGCT ACATTAGACGGCCTAGAACACTTAGTAAAAGTGTTAGTAG TAAATAATTATGAAATAAAATAATAACTAAAATAAAATCC GTCTTATATACATGGAATGCCTCGGAAGTTAGACGGTAAT TTCTTAATCAACTAAATTTAATAAACAATATTACTAAATA ATTATAAAGAACCAATTATGTTAATCAATAAAGTAAAAAG AACAACAATTATGACAATCAATAAAATAAAAGGAATAATA ATTATGGCAATCAATAAATCAAAAAAATAACAATTATGTC AATCAATAAAGTAAAAGGATTAACAATTATACTAATCAAT AAAGCAAAAGAAACAACAATAATTCTTAAAGTAAAAGGGA AATCATTAAAGTTTATATTTATTATTTNNNNNATAAAAGA CACTATAACAAGAAAATAATCTATAACCATAGATAATAAT CATGACATAAAATATTCAAGACTTGCAAAAATGTATTCAA AAATGAATTTGAACTAAATTATTAGGTCTTTTAAATGGGA AGGCCACCAAATAATTGTACCATTTGGACAATTCATCCTT CTTGGGCTTTAGCTCTTCTTCCCTAATAAGACTTCTTTGG CTCTACAATTGAAGCCCATTGAGCTTATCATTAAACTTCT TGGTTTAAGATCTTGTTATGGGTCTTCTTTGATCTTCTAA AGCTTCATCCTTTTCATCCTTATCCTTAATAGGAGTAGAG CTTTGTATGATGCTATCAGGGCTAGACCTTTTCCCCACTA ATTTTGACCCCTTGAACAAGAATATAAAGTCAAATTTTTG ATATCATGCATGGATTTTGAGATATATGTAATTTCAAATT TGAGGCATTTCGAGGCACATTTTCGAACATTTTTTGGGGT CATTTCATGAGTCCTTTCTAGATAAATCAGTCACACAATA GATTTGAGAAATCTTGAGTTGACTATGTGAACAATTGAGC TTTAATATAAAATGATCAAAAAATTGCAAGTGTGTGGNNN NNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNN
Developer NIVTS
Document Nunome et al. (2009) Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor. Appl.Genet. 119: 1143-1153
motif (tg)10ta(tg)9
PCR product (bp) 283
fwd primer emg11N23/U
fwd primer seq. ggccgtcgtatgtagtgcttcac
rev primer emg11N23/L
rev primer seq. tctaacttccgaggcattccatgt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
Line allele-1 allele-2
AE-P03 287 287
EPL-1 287 287
LS1151 (S.linneanum)
LS1934 276 276
LS4021 (S. incanum)
Nakate Shinkuro 276 276
Senryo 2 287 287
Shironasu 276 276
WCGR112-8 276 276
White Egg 286 286
Population Linkage Group Position
AL2010 E_06 38.3
LWA2010 LWA_06 37.649
LWAE2012 E_06 44.241
DB Program Definition E-Value
EST Name Species Strain